Elaeis guineensis (African oil palm): 105058689
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Entry
105058689 CDS
T03921
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105058689
09122 Translation
03013 Nucleocytoplasmic transport
105058689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105058689
03041 Spliceosome [BR:
egu03041
]
105058689
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105058689
Spliceosome [BR:
egu03041
]
Complex C
Other components
EJC/TREX
105058689
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105058689
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
Thoc2
THOC2_N
DUF2247
DUF4350_C
ABPF_N
Motif
Other DBs
NCBI-GeneID:
105058689
NCBI-ProteinID:
XP_073105250
UniProt:
A0ACM7BSW8
LinkDB
All DBs
Position
15:complement(72721658..72753849)
Genome browser
AA seq
1487 aa
AA seq
DB search
MENDAITEQAPEVENNQKLGLLIGFIFVDDWYHAQILFDRLSHLDPVQHIQICEGLFRVI
EKTMSAAYAIVYQTHLQSRAGSNVVESTAGSSIQNSSIDLPREFFQMLAAAGPYLHRDAV
LLQKVCRVLRAYYLCAEELAGLRAKEAKLRVEEALGKCVLPSLQLIPANPAVGQVIWELL
SLLPYEDRYRLYGEWEKDDERIPMVLAARQIAKLDTRRILKRLAKENLKQLGRMVAKLAH
SNPMTVLRTIVHQIEAYRDMITPVVDAFKYLRQLEYDVLEYVVIERLTQGGREKLKDDGL
NLSDWLQSLASFWGHLCKRYPSMELRGLFQYLVNQLKKGSGIELVLLQELIQQMANVQYT
ENMTEEQLDAMAGGETLRYQATLFGMTINNKALTKSTNRLRDSLLPKEEPKLAIPLLLLI
AQHRSMVIINADALYIKMVSEQFDRCHGMLLQYVEFLLSAITPSMIYAQLIPPLDDLVHK
YHLDPEVAFLVYRPVMRLFKSISGAEICWPLDITEEPNVSSTNEEAEPSYISCDVVLDLG
SPWRPVNWSDLLDTVRSMLPQKAWNSLSPDLYVTFWGLTLYDLYVPRHRYESEITKQHAA
IKALEELSDTSNMAITKRKKDKERIQELLDRLSCEFQKHEQHVASVRQRLSHEKDKWLSS
CLDTLKINMEFLQRCIFPRCIFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQ
PMICCCTEFEAGRLGRFLYETLKMAYHWKSDESIYEHECGNMPGFAVYYRFPNSQRVTYS
QFIRVHWKWSGRITRLLVQCLESTEYMEIRNALIVLTKISSVFPVTRKSGINLEKRVAKI
KGDEREDLKVLATGVAAALAARKGSWVSEEEFGMGHIDLKHAAASTKSPAGNLGNAPNGS
ALGISQNEMSGTRNATTGNQVADPLDIIKDRMTRAKSTDGRSDRSEDGVLLKADSAQQKS
RSSSSMNGPDSQTHASLLPKPSGIMKNLDELLKVSPEETFTKVASKGTVESETRPLQKRS
AQNSLGSLPKQELVKGDAKSRKSISRTAYQQFSAMADRDLSAHQSESRQGDTAMNSSSTS
CGNLNSSGKVASSSSKMNDVHVSVSKMDSGPLKPLDDTVEAPDAFPKEQKRFASAEERDR
SNKQRKGDMDGKDGEAMEVRLSDKNRIFDARSMDKSHFSDHERPKIEEQSPIRPVDKHSD
KSRDKTIERYDKDHRENLDRPDKSHGVDILEKSRDRSIERHGRERSVERVQERAADRNID
RSVDKSRDDRSKDDRNKSRHNEAPMDKVHSDERFHGQGLPLPPPLPPSFVPQSVGGSQRD
EDPERRVGNTRHTQHLLPRHDEKECRRSEENVLASQNDAKHRRDDECRENKWEEQGDVPN
KVEERDREKGNVLKDDTDPTAAPKRRKLKRDHTSSSEAGGKYLPFVPGPPPPPRLALGIS
QSFDARERGDRKGIMVQHRAVYMDEVPRVHGKEAASKINRRETDQYP
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgatgctattacagaacaagcacctgaggttgaaaataatcagaaacttggt
ttgcttattggttttatttttgttgatgactggtaccatgctcagatactatttgatcgt
ctgtcccatctagatcccgttcagcatatccaaatttgcgagggcctatttagggtcatt
gagaagactatgtctgcagcctatgctattgtctatcaaacacatcttcaaagtcgtgct
ggttccaatgttgtggaatcgacagctggatcttctatccagaattcttctattgatctc
cctcgtgaattttttcagatgcttgctgctgcaggaccatatcttcatcgtgatgctgta
ctgcttcagaaggtgtgcagagtgttgagagcatactacctctgtgctgaagaattagct
ggccttcgagctaaagaagctaagcttagggttgaagaagcacttggaaaatgtgtgctt
ccttcattgcaattaatacctgcaaatcctgcagttgggcaagtgatatgggaactcctt
tctctgctcccctatgaggatcgatatcgcctgtatggtgaatgggaaaaggatgatgaa
agaatcccaatggttctggctgcaaggcagattgcaaagttggacactagaagaatactg
aaaaggcttgcaaaggaaaatttgaagcagctgggtcgcatggtggccaaacttgctcat
tctaatccgatgactgtgcttcgcacaattgttcaccagattgaggcatacagggatatg
ataacaccagttgtagatgccttcaagtacttgagacagctggaatatgatgtgttagaa
tatgttgtaatcgaacgtctaacacaaggaggacgtgagaagcttaaagatgatggcctg
aatttgtcagattggcttcagtctcttgcatccttttggggccatctgtgtaagaggtac
ccttcaatggagttgagaggcctttttcagtatcttgttaatcaattgaagaagggctca
ggaattgagcttgttctgttgcaggagcttattcagcagatggccaatgttcaatacact
gagaacatgactgaggagcaacttgatgctatggcaggaggtgaaacattgagatatcaa
gctactctatttggaatgactataaacaataaggcattgactaaatctaccaacagactt
agggactccttacttccgaaggaagagcctaagctggctattcctcttttgttactaata
gctcaacatcgctccatggttatcataaatgcggatgcattatacatcaaaatggttagc
gagcagtttgacaggtgccatggcatgcttcttcaatatgttgagtttctgttgagtgcc
ataactccatctatgatctatgctcagctgattcctcctctagatgatcttgttcacaag
taccatcttgatccagaggtagcatttctggtatatcgccctgtgatgaggctcttcaaa
agtataagtggagctgaaatatgctggcctcttgacataactgaagagcccaatgtttca
agcacaaatgaagaagcagagccttcatatatatcctgtgatgttgttttggatcttgga
tcaccctggaggcctgtcaattggtcagaccttcttgacacagtccggtcaatgctgcct
cagaaagcttggaatagcctctctcctgatctttatgttacattttgggggcttacactc
tacgatctttatgttcctcgacaccgttatgaatcagagatcacaaagcagcatgctgct
attaaagccttggaagaactttctgacacctccaatatggctatcacaaagcggaaaaaa
gacaaggaaaggatccaagagctacttgacagattgagttgtgaatttcaaaagcatgaa
caacatgttgcatctgtgcgccaaaggcttagtcatgagaaggacaaatggctgagttcc
tgcctggatactctaaagataaacatggagtttcttcaacgatgcatcttcccacgctgc
atcttcagcatgccagatgctgtgtattgcgctatgtttgtgcatacgctacattcactt
ggcacaccattttttaacacggtcaaccatattgatgttcttatatgtaaaaccctacag
ccgatgatctgttgctgcaccgaatttgaagctggcagacttggaaggtttttatatgag
acactaaagatggcttaccattggaagagtgatgagtccatatatgaacatgaatgtgga
aacatgccagggtttgctgtctattacagattcccaaacagtcagcgtgtaacttatagc
caatttattagagtacactggaaatggagtggaagaataaccagattgcttgtgcagtgc
ttggaatctactgagtacatggaaatacgaaatgctcttattgtgttgacaaaaatttct
agtgttttccctgttactcggaagagtggtattaatcttgaaaagcgggtagctaaaatt
aaaggggatgagagagaagatttgaaagttttggctactggtgtagctgccgctttggct
gcacgcaagggttcatgggtttctgaggaagaatttggtatgggtcatattgatctaaag
catgcagcagcatcaacaaaatcacctgctggtaacctgggcaatgcaccaaatggttct
gctcttggtatatctcagaatgagatgtctgggacaaggaatgccactacggggaatcag
gtagcggatccattggatataattaaagatcggatgacacgtgcaaaatctacagatggc
aggtcggatcgatcagaagatggagtgcttttgaaagctgattcagcacaacaaaaatca
aggagtagctcttccatgaatgggcctgatagtcaaacacatgcttctttgctgcctaag
ccttctgggatcatgaaaaatttagatgaacttctaaaagtttcaccggaggaaacattt
acaaaagttgcttcaaagggcactgtggaatctgagaccagaccactgcaaaaacgttca
gcacagaattctcttggtagtctaccaaaacaagagttggtcaaaggagatgctaaatct
agaaaatcaatcagcagaactgcctatcagcaattttctgcaatggctgacagggatctt
tcagctcatcaatcagagagtaggcaaggtgatactgctatgaattcttcatccacttcc
tgtggtaacttaaattcatcaggaaaagtagcaagttcctcctcaaaaatgaatgatgtg
catgttagtgtatccaagatggacagtggacctctcaaacccttggatgacactgtagaa
gcgcctgatgctttccctaaagagcaaaagagatttgcttcagctgaagaacgagataga
tcgaacaaacaaaggaaaggagacatggacggaaaggatggtgaggctatggaagttcga
ttatctgataaaaatagaatttttgatgccagatcaatggataaatctcacttttcagat
catgagaggcctaaaattgaagaacaaagtcccattaggcctgtggataagcattctgat
aaatctagagataaaactattgaaagatatgataaagaccacagggaaaacttggatcgg
cctgataagagccatggtgtggacattcttgagaaatcaagagataggtcaattgaaaga
catggaagagaacgttctgttgaaagagtgcaggagagagcagcagataggaatatagat
aggtctgttgataaatctagagatgacagaagcaaagatgataggaataaatcgcgacac
aatgaggctcccatggataaggtgcattccgatgagcgttttcatggacaaggtttgccg
ctgccacctccactacctccaagttttgttccccaatctgtcggtggtagtcaaagagat
gaagaccctgaaagaagggtcggtaacactagacacacacagcatctgttgcctaggcat
gatgaaaaagaatgtaggcgctcagaggagaatgttttagcatcacagaatgatgcaaaa
catagaagagatgatgagtgtcgagaaaacaagtgggaggaacaaggagatgtgccaaat
aaggtagaagagagggacagagagaaggggaatgtactgaaggatgatacggaccctact
gcagcccccaagcggcgaaagcttaaaagggaccatacatcctcttctgaagctggtggg
aagtatttaccatttgttccgggaccgccgccaccaccaagactagcattggggatatct
caatcgtttgatgcaagagaaaggggagatagaaaagggattatggtgcagcatcgagct
gtttacatggatgaagttccaagggtgcatggcaaagaagccgcaagcaagatcaatcgt
cgggagactgatcagtatccttga
DBGET
integrated database retrieval system
