Elaeis guineensis (African oil palm): 105058802
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Entry
105058802 CDS
T03921
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105058802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105058802
03016 Transfer RNA biogenesis [BR:
egu03016
]
105058802
Enzymes [BR:
egu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
105058802
Messenger RNA biogenesis [BR:
egu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
105058802
Transfer RNA biogenesis [BR:
egu03016
]
Prokaryotic type
tRNA degradation factors
105058802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
Urease_gamma
KH_PNO1_2nd
Ribul_P_3_epim
S1_RRP5
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
105058802
NCBI-ProteinID:
XP_010940149
UniProt:
A0A6I9SB84
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All DBs
Position
15:complement(74689035..74704207)
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AA seq
989 aa
AA seq
DB search
MAVAALRGRAYPLMSSVPSFLTWRRLGFRSFCSGHLGFLSQPPEAESTAAAGPVPGSKIL
ETFREEFEIGSRTISIETGKVARFANGSVVITMDETNVLSTVASARGDGARDFLPLTVDY
QEKQYAQGVIPTTFMRREGAPKERELLCGRLIDRPIRPLFPPGFYHDVQVMVNVLSSDGK
HDPDVMAANATSAALMLSGIPWNGPIGVIRVGRIDGKFVFNPTMDELSLSDLNLVYACTR
DRTLMIDVQAREISEKDLQAGLKLAHPEAVKYIDPQIRLAEKAGKKKKEYKLSMISDRTL
EKIRSLAEAPIEAVFTDSTYGKFERGEALDKITHAVKAKLEEEGDEESLNVLPKAIDMVR
KKIIRHRIIKEGVRVDGRQLDEVRPLYCESGTYPILHGSSLFSRGDTQVLCTVTLGAPGD
AQRLDSIVGPPTKRFMLHYSFPPFSINEVGKRGGLNRREVGHGTLAEKALLAVLPPENDF
PYTVRVNSEVMASDGSTSMATVCGGSMALMDAGIPVREHVAGVSVGLVTEVDPSTGMIND
YRILTDILGLEDHLGDMDFKIAGTRKGITAIQLDIKPAGIPVDIICECLEPARKGRNHIL
DRMEQEICAPRTMGDGSTPRLATLKFSNNSIQRLLGPLGSQRKKIEQETGARIAVSDGTV
TIVAKNRSVMEKAKEQVDFLIGREIEVGGIYKGVISSIKEYGAFVEFNGGQQGLLHISEL
SHEPVSRVSDVVSVGQDLSVMCIGQDVRGNIKLSLKAMLPWAGSEKKNLESQDSVPPKQE
VNVWASVENVPMCQENQDSEVEPATNSMPAVVIRSAAECDAQDIAAGQHSINKSGKGTKT
SPRPYNASSRHRDDFRSTLTKRKPISSPNQIPMKKESEPKDFCGSKPETDSGPGTLLHAL
MQNDADVKPKSLGSTSVRAGSLKLGDRVIAKVYQIRTHGLVLELGGGLRGMYKFEINGRR
DFEVGKELHVQCSSFSSKGIPVFSLLEDE
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggctctgagggggagggcgtaccctctgatgtcgtcggtgccctccttc
ctcacgtggcgccgcctcggcttccgttccttctgcagtggccacctcggcttcctctcc
cagcccccggaggcagagtccaccgcggccgctggtcccgtccccggctcgaagatccta
gagactttcagggaggagttcgagatcggatcccgcaccatctccatcgagaccggtaag
gttgctaggttcgccaacggatccgtcgtcatcaccatggacgagaccaacgtgctctcc
accgtcgcctccgccaggggggacggggctcgcgatttcttgcccctcaccgttgattat
caagaaaagcaatatgcacaaggtgtcattcctaccacattcatgcgcagggagggtgcc
cccaaggaacgcgaacttttatgtggtcgtcttattgaccgacctatccgtccactcttt
cctccaggcttttaccatgatgtccaggtcatggtaaatgttctttcgtctgatgggaag
catgatccagacgtaatggcagcgaatgccacatctgctgctcttatgctatctggtatc
ccttggaatgggcctattggtgtgatacgtgtggggaggatagatgggaaatttgttttt
aatccaaccatggatgagctaagcttaagtgatctcaacttggtctatgcatgtacaagg
gacaggacactaatgatagatgtacaagctcgtgagatctcagaaaaagatctacaagct
ggattaaagcttgcacatcctgaggctgtcaaatacattgacccccagattagattggct
gaaaaagctggcaaaaagaagaaagaatataaattatcaatgatttcagataggacacta
gagaagatacggagcttggcggaagcacctattgaagctgtctttacggattcgacatat
ggcaagtttgaacgtggagaggccttggataaaattactcatgctgtaaaagccaaactt
gaagaagaaggtgatgaagagagcttgaatgttctgccaaaggcaattgatatggttagg
aaaaagataattcgccataggatcatcaaggaaggtgttagagttgatggtagacaactt
gatgaagttagacctttgtattgtgaatctggtacatatcccattttacatggatcctca
cttttctcacgtggagacactcaggtactatgcacagttacacttggggctcctggagat
gctcaacgactggactctattgttggcccccctacaaaacgtttcatgcttcactatagt
tttccaccattctcaatcaatgaggttggcaagcgcggtggtttgaataggcgcgaagtt
ggacatggtactctggcggagaaggctttgcttgcggtgttacctccagagaatgacttc
ccgtacaccgttcgtgtcaattcagaagtcatggcctctgatggttcaacttcaatggca
actgtatgtggaggaagtatggctttgatggatgctggcattcctgtaagggaacatgtc
gctggtgtttcagtgggccttgttacagaagtggatccatcaactgggatgataaatgat
tatcgcatactgacagatatattgggtcttgaagatcacctaggggacatggacttcaaa
attgccggaacaagaaaaggaattactgcaattcagttagatataaaacctgctggaata
cctgtagacataatttgcgaatgtttagaaccagcacgaaagggccgcaatcatatcctt
gaccgcatggagcaagaaatatgtgcgccacgtaccatgggtgatggaagtacccctcga
ttagcaactttgaagtttagcaataactccattcaacgtttgcttgggcctctaggttct
caaaggaaaaaaattgaacaagaaacaggtgcacgaattgctgtaagtgatgggacagtt
actatagttgcgaaaaatcggtcagttatggaaaaagccaaagaacaggttgattttctt
attggacgtgaaattgaagttggtggaatttacaaaggtgtcatctcatcaattaaagaa
tatggtgcttttgtggaattcaatggtggtcaacaaggtcttcttcacatctctgagctg
tcgcatgaaccggtatctagagtctcggatgttgtatctgttggccaagatctatcagta
atgtgcattgggcaggatgtgagaggtaatatcaaactgtctctgaaggccatgcttccc
tgggctggatctgaaaagaagaatttggagagtcaagattctgttcctccaaaacaagaa
gttaatgtttgggcctctgtggagaatgtgcctatgtgccaagaaaatcaagacagtgaa
gttgagcctgcaacaaattccatgccagcagtggtaatccggagtgctgcagaatgtgat
gcacaggacattgctgctggtcaacattccatcaataagtctggaaagggtacaaaaact
tcgcctaggccttataatgcttcgtcaagacatcgggatgatttcagatcaaccctcact
aagagaaagcctataagctcaccaaatcagataccaatgaagaaggagagtgaaccgaaa
gatttctgtggaagcaagccagaaactgacagtggacctggaaccttgttgcatgcactg
atgcagaatgatgcagatgtgaagcctaaatctttaggctctaccagtgttcgcgcaggt
tcactgaagctgggagaccgtgtaatagcaaaggtataccagatacgcacacatgggctg
gtacttgaattgggtggtggattgcgaggaatgtataaatttgagataaatggccgaagg
gattttgaggtaggtaaggagctccatgtgcagtgttccagcttctctagcaagggcatt
ccggtattttcgttattggaagatgagtag
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