Elaeis guineensis (African oil palm): 105058916
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Entry
105058916 CDS
T03921
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
egu03015
mRNA surveillance pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105058916
09122 Translation
03013 Nucleocytoplasmic transport
105058916
03015 mRNA surveillance pathway
105058916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105058916
03041 Spliceosome [BR:
egu03041
]
105058916
03009 Ribosome biogenesis [BR:
egu03009
]
105058916
03012 Translation factors [BR:
egu03012
]
105058916
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105058916
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105058916
mRNA cycle factors
Stress granule specific factors
105058916
Spliceosome [BR:
egu03041
]
Complex C
Other components
EJC/TREX
105058916
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
90S particles
Helicases
105058916
Translation factors [BR:
egu03012
]
Eukaryotic type
Initiation factors
eIF-4
105058916
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
StrH_N
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
105058916
NCBI-ProteinID:
XP_010940294
UniProt:
A0A6I9SAB2
LinkDB
All DBs
Position
16:41343772..41352869
Genome browser
AA seq
409 aa
AA seq
DB search
MAAAAMAAPRGRQPQGRGVDDENLVFETSPGVEAITSFDQMGIRDDLLRGIYAYGFEKPS
AIQQRAVIPIIQGRDVIAQAQSGTGKTSMIALSVCQMVDTTSREVQALILSPTRELAAQT
EKVILAIGDYINVQAHACIGGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIK
LLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNF
TVSSMHGDMPQKERDAIMAEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI
HRIGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcagcgatggcggcccctcggggtcggcagccccagggccggggggtcgac
gacgagaacctggttttcgagacgagccccggggtggaggccatcacgagcttcgaccag
atggggatccgcgacgacctcctccgggggatctacgcctacggcttcgagaagccctcc
gccatccagcagcgggccgtgattcccattatccagggccgcgacgtcatcgcccaggcc
caatctggtaccggaaagacatccatgatcgctctctccgtctgccagatggtggacacc
acctcgagggaagttcaggcattgatcctgtcaccaacgagagaacttgctgcccagact
gagaaggtgatattggctattggtgactacataaatgtacaagcccatgcatgcattggt
gggaaaagcataggcgaggatattagaaaactagagtatggagttcatgtggtttcaggg
acaccaggcagagtctgtgatatgatcaagagaaggaccttacgcacaagagccatcaag
ctcttagtcctcgatgaatctgatgagatgttgagcagaggtttcaaggaccaaatatat
gatgtataccgatatcttcctccagaacttcaggttgttctgatttctgcaacacttcct
catgaaatattggagatgaccagcaagtttatgactgatcccattagaatacttgtcaag
cgtgatgagttgacattggaggggatcaaacaattctttgttgctgtcgagagagaggaa
tggaagtttgatacattgtgtgatctatatgacaccctcacaattactcaagctgttatt
ttctgtaacacaaaaagaaaggttgattggttgactgaaaaaatgcgcagcaataacttc
acggtatcttctatgcatggtgacatgcctcagaaggagagggatgcgatcatggcagag
ttcaggtcaggcgcaacccgtgtgttgattacaacagatgtatgggctcgcgggcttgat
gttcagcaggtttctctagtgataaattatgatcttccaaacaatcgagaactttacata
catcggattggtcggtcgggtcgttttggtcgtaagggtgtggcaataaactttgtgcgc
aaggatgacatcaggatattaagagatattgaacaatattatagtactcagatcgatgaa
atgccaatgaatgtggcagatcttatttga
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