KEGG   Elaeis guineensis (African oil palm): 105058932
Entry
105058932         CDS       T03921                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu04142  Lysosome biogenesis
egu04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:egu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    105058932
   04148 Efferocytosis
    105058932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:egu04131]
    105058932
Membrane trafficking [BR:egu04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    105058932
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_IFT122_1st VPS18_solenoid_2nd WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 zf_RING_Vps8 Beta-prop_WDR3_2nd zf_RING_Vps8_fungal Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_WDR11_2nd EIF3I Beta-prop_ACSF4 WD40_Gbeta Beta-prop_WDR36-Utp21_1st PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_WDR19_1st TPR_YpiA PROPPIN Beta-prop_IP5PC_F zf-RING_2 BUD22 PI3K_1B_p101
Other DBs
NCBI-GeneID: 105058932
NCBI-ProteinID: XP_010940318
UniProt: A0A6I9SBJ7
LinkDB
Position
16:complement(41670793..41703863)
AA seq 968 aa
MNIEELKSKREREENRAAGPIRATQISPAIMASDHTLENGVDGDDEREEDDDEEEEEEED
GEEEEEEEEEEEPRLKYQRLGGSVPSLLSTDAASSIAIAERMIALGTHDGTVHILDFQGN
QVKEFAAHTATVNDLCFDVEGEYIGSCSDDGSVVIYGLFTDERLKFEYYRPMKTIALDPD
YSRKSSRRFVAGGLAGQLFLNTKNWLGYSKQVLHDGEGPIHAVKWRTSLIAWANDAGVKV
YDMANNQRITFIERPRGSPRPELLLPHLVWQDDTFLVIGWGTCVKIAAIRTNPPRGANGI
EKNMPISTMKYVDIVASFQTSYYISGIAPYGDALVILAYIPEEENGEKDFSSTIPSRQGT
AQRPEVHIVTWKNDELTTDALPVHGYEHYKAKDYALAHAPFAGSSYAGGQWAAGDEPLYY
IVSPKDVVIAKPRDAEDHISWLLQHGWHEKALAAVEAGQGRTELLDEVGSRYLDHLIVER
KYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTLYEVALVALA
TSPSLHQLLLATVKSWPTTLYSASTVISAIETQLNTSSMTDSLKEALGELYIIDTQYEKA
FSLYADLMKPEIFDFVEKHSLHDAIHDKVVQLMILDSKRAVSLLIQHRDIISPSEVVGQL
LHDSKKCDNRFFLHLYLHSLFDIDSEGGKEFHDLQVELYAEYEPRMLLPFLHSSHHYKLE
KAYEICVKKDLVREQAFILARMGNAKRALAVYINKLEDIEEAVDFVSTQHDDDLWEELIK
QCLHKPEMVGMLLEHTVGNLDPLYIVSMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCN
DILKADCVNLLIKYYKEARRAIYLGSIEEETRGKRENEASAPTIERVANARMMVVQSITR
GNGRCCLCFDPLSIQNVNVVVFFCCHAYHVPCLQDGSDAVGTVSNNDDDHDDDGGSRMRC
VLCTTAGG
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgaacattgaagaactaaaatccaaaagagagagggaggagaaccgggccgccggtcca
attcgcgccacccagatctcgccggcgatcatggcatccgaccacaccttggaaaacggt
gtcgatggcgacgacgagagagaagaagacgacgacgaggaggaagaggaggaggaggac
ggggaagaagaggaggaggaggaggaggaggaggagccgaggctcaagtaccagagatta
ggaggcagcgtgccgtctctcctttcgaccgatgccgcgtcctccatcgccatcgcggag
cggatgatcgcgctcggaacccatgatggcaccgtccacatccttgatttccagggcaat
caggttaaagaatttgctgctcatacagctactgtcaatgacctttgttttgatgtggaa
ggcgaatatattggcagctgctcagatgatggatctgtggtcatatatggtctctttaca
gatgaaaggttaaaatttgagtattatcgtcctatgaaaaccatagctctagaccctgat
tattcaagaaaatcatccagaagatttgttgctggtggtttagctggtcaacttttttta
aatacaaagaactggctaggctacagcaaacaggttctacatgatggcgaaggtccaata
catgctgtgaagtggaggacaagtcttattgcttgggcgaatgatgcaggggtgaaggtt
tatgacatggcaaataatcaacgcatcacatttattgagaggccacgaggaagtccacgg
cctgagcttttacttcctcacttagtttggcaggatgacactttcttggtaattggctgg
ggaacatgtgtaaagattgcagctattagaaccaatccacctcgtggagcgaatggaata
gaaaagaatatgcccatatcaaccatgaagtatgtggatattgtggcatcttttcagact
agctactatatatctggtattgcaccctatggtgatgctttagtcattctagcatacatt
cctgaggaggagaatggagaaaaagattttagtagcaccattccatcacgccagggaact
gcacagagaccagaagtacacattgtgacatggaaaaatgacgaacttacaacagatgct
ctacctgtgcatggctatgagcattacaaggcgaaggattatgcccttgcacatgcccct
tttgcaggaagcagctatgcaggtggccagtgggctgctggtgatgaacctttgtattac
atcgtatctcccaaggatgttgtgattgcaaagcctagggatgctgaagatcatatatct
tggcttcttcaacatggttggcatgaaaaagcattagctgcagttgaagcaggacaagga
cggactgagcttcttgatgaggtgggatctagataccttgatcatttaattgttgaaaga
aaatatgcagaagctgcttctttgtgtcctaaattactacgtggatctgcttcagcctgg
gagagatgggttttccactttgctcatctccgccagctgcctgttttggttccttacatg
cctacagaaaatccacggctgcgtgatactctttatgaggttgcccttgttgctttagct
actagtccatcattacaccagcttctcttggcaactgttaaatcatggccaactacatta
tattcagcatcaactgttatctctgctattgagactcagcttaatacctcctccatgact
gattcactaaaagaggctttaggtgaactatacataattgatactcagtatgagaaggct
ttttcattatatgctgatctgatgaagcctgagatatttgacttcgttgaaaaacatagc
ttgcatgatgccattcatgataaggttgtccagctgatgatactggacagtaaaagagcc
gtatctctattgattcaacatcgtgatataatatccccttctgaagttgttggacaactg
ttgcatgacagtaaaaagtgcgacaatagatttttcttgcatttatacctgcattcactg
tttgacattgactcagaaggagggaaagaattccatgatttgcaggtagagctttatgct
gaatacgagccacgaatgctactcccatttcttcatagcagtcatcattataagctagag
aaggcttatgaaatttgtgttaagaaagatcttgtaagagagcaggcatttatccttgca
aggatgggcaatgccaaaagagcgcttgcagtttacataaataagttggaagatatagag
gaggctgtggatttcgtaagtacacagcatgatgatgatctatgggaggagttaattaag
caatgtctccataagcctgaaatggttgggatgttgttggagcacactgttggtaatctt
gatccgctgtatattgtcagtatggtgcccaatggattagagataccacggttaagagat
cgccttgtcaaaatcatcactgattatcgaacagaaacctctcttagacatggatgtaat
gatatcctcaaggctgactgtgtcaatctgttgatcaagtattacaaagaggctcggcgg
gccatctacttgggcagtatagaagaagaaacacgtgggaagagggaaaatgaggcttct
gctccaacaattgagagagtagcaaatgcaagaatgatggtagttcaatccataacaagg
ggcaatgggaggtgttgcttgtgctttgatcctttgtccattcaaaacgtcaatgtcgtt
gtattcttttgctgccatgcatatcatgtcccctgtctccaggatggctcagatgctgtg
ggcactgtatctaataatgatgatgaccatgatgatgatggtggatctcgaatgcgttgt
gttttatgcactacagctggtgggtaa

DBGET integrated database retrieval system