Elaeis guineensis (African oil palm): 105059021
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Entry
105059021 CDS
T03921
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105059021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105059021
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105059021
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
105059021
NCBI-ProteinID:
XP_010940453
UniProt:
A0A6I9SJ16
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Position
16:complement(42879981..42891881)
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AA seq
200 aa
AA seq
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MVTSPVVNMYPLSNYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRMSAEAILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLGANSPSFQQNWQIGECVAVWW
RPNFETIMYPYCPPHITKPKECKKLFLVHLPEREYFAVPRNLKLLAVPLFELYDNVTRYG
PVISTIPQQLSRFQFNMVSS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgtcaccggtggtgaatatgtaccctctctcgaactacacgttcgggacgaag
gagccgaagatggagaaggacacttccgtcgctgatcgccttgctcgcatgaaggtcaac
tatatgaaggaaggcatgcggatgagtgctgaggcaattttactggtgcaggaacacaac
catccccatatattgctattacaaattggaaatacattttgtaaacttcctggtggacgt
ttgaagcctggagagaacgaaattgagggtttgaaacggaagctgtctagcaaacttggg
gccaactcaccttcctttcagcaaaattggcagattggggagtgcgttgctgtgtggtgg
agaccaaactttgaaacaataatgtacccatattgtcctcctcatatcaccaagcccaag
gagtgtaagaagctttttcttgttcacttgccggaaagagaatactttgctgttcccaga
aacttgaagttgcttgctgttccattgtttgaactgtatgacaatgttacgagatatgga
cctgttatctcaaccattccacaacaattatcaagatttcagttcaacatggttagttcg
tga
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