Elaeis guineensis (African oil palm): 105059170
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Entry
105059170 CDS
T03921
Name
(RefSeq) uncharacterized protein isoform X1
KO
K07573
exosome complex component CSL4
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105059170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105059170
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105059170
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105059170
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
105059170
NCBI-ProteinID:
XP_010940697
UniProt:
A0A6I9SJG7
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All DBs
Position
16:45445565..45461058
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AA seq
194 aa
AA seq
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MGGEEGVVTPGEVVGESSQLIAGRGVYVAPNGRTLRASLTGLRKILPPPPGSTDQRSTVE
VVGHKAHGAVPQPGSVVIARVTKVMPRMASADIMCVDAKAIREKFTGIIRQQDVRATEID
KVHMYLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGATMVPISWTEMQCP
LTGQVEQRKVAKAD
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagaagaaggtgtagtgacccccggcgaggtggtgggcgagtccagccaactg
atcgccgggaggggagtgtacgtggcgcccaacgggcgcaccctgcgcgcttccctcacc
ggcctccgcaagatcctccctcctcctccgggctccactgaccagagatccaccgtggaa
gtcgtagggcacaaggcccatggagctgtcccgcaaccggggtctgtagtcatcgctcga
gtgacaaaggtgatgcccaggatggcttccgctgatataatgtgtgttgatgccaaagct
attagggaaaagtttacaggcataattaggcaacaagatgttcgtgcaactgaaattgat
aaagtgcatatgtatttgtcatttcgtcctggtgacattgtcagagccttagttctctct
cttggagatgcaagggcgtattacctttccactgcaaaaaatgaattgggagtagtatcc
gctcaaagtatcgcaggtgctactatggttccaatcagttggacagagatgcaatgccca
ctgactggccaggttgagcagagaaaagttgcgaaggcagactag
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