Elaeis guineensis (African oil palm): 105059292
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Entry
105059292 CDS
T03921
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X2
KO
K12890
serine/arginine-rich splicing factor 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105059292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105059292
Spliceosome [BR:
egu03041
]
Common components
Common spliceosomal components
SR proteins
105059292
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_YTH1
Smg4_UPF3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
105059292
NCBI-ProteinID:
XP_010940841
UniProt:
A0A6I9SCQ1
LinkDB
All DBs
Position
16:complement(27176664..27210222)
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AA seq
250 aa
AA seq
DB search
MSGRLSRTIYVGNLPLDIRESEIEDLFYKYGRIVEIELKNPPRPPGYCFVEFESSRDADD
AVRGRDGYNFYSHRLRVELAHGGRGQSSSVGRGSGYASGGGSKYGSSRRSEFRVVVRGLP
PSASWQDLKDHMRKAGDVCFAQVFRDGDGTMGLVDYTNYEDMKYAIRKLDDSEFRNPFSR
SYIRVRSYERSMSRSRSRSRSPSRSRSPRRSQSKSMERPVSRSPSKSVSPRSRSASPARF
SRSRSRSRSG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttaagtcgtaccatctatgttggcaaccttcctctagatatacgagaa
tcagaaattgaagatttattttacaagtacggtcgtattgtggaaattgaattaaagaat
ccacctcgccctcctggttattgttttgtggagtttgaaagttctagagatgctgatgat
gcagtccggggtcgtgatggctataatttctatagccaccgtttgagggttgagctagct
catggtggcagagggcaatcatcttcagttggacggggcagtggatatgcaagtggggga
ggcagtaaatatggaagttctcgccgttctgaatttcgagttgttgttcgtgggcttcct
ccttcagcttcatggcaagatttaaaggatcatatgagaaaggctggggatgtatgtttt
gctcaagtttttcgggatggtgatggcaccatgggtttggtcgattatactaattatgag
gacatgaagtatgctattcgaaaacttgatgattctgagttccgaaatcccttttcgagg
tcctatattcgggtaagaagctatgagagaagcatgtcgaggagtcgaagccgaagtagg
agccctagtagaagcagaagccctaggcggagtcagagcaagtcaatggaaagacctgtc
tctagatcaccatcaaaatctgtttctccaagatccagatctgcttctcctgccagattt
tcaaggtcaaggtctagatcaaggtcgggctaa
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