Elaeis guineensis (African oil palm): 105059349
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Entry
105059349 CDS
T03921
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105059349
03036 Chromosome and associated proteins [BR:
egu03036
]
105059349
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105059349
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105059349
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105059349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
105059349
NCBI-ProteinID:
XP_010940916
UniProt:
A0A6I9SCW1
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All DBs
Position
16:30225014..30233132
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AA seq
711 aa
AA seq
DB search
MPSLLLSSPSELDDLNKLKHKKSKKAASMAADLDLNGSVEEEKKSKKKKKNKNLESEDGE
IYNSDGEGSEKKISKKKRKASDEERSDTISDAAARANGSALKKPKLRKNDEDEEVIARGE
NEGAANPNAVSKFRISKVLREKLKSKGIESLFPIQAMTFDSILDGSDLVGRARTGQGKTL
AFVLPILESLTNGQYKTARKTGCGRPPSVLVLLPTRELANQVYADFQAYGGAVGLSSCCL
YGGSPYRAQVLALKRGIDIVVGTPGRIKDHIERGTLDLKFLKFRILDEADEMLNMGFVDD
VELILGKVEDVNKVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASASVRHLV
LPCTRQARAQIIPDIIHCYSCGGRTIIFTETKESASQLAGLLPGSRALHGDIVQAQREVV
LAGFRKGRFLVLVATNVAARGLDIHDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAIL
LYEPRYSSSISRLERESGVKFEHISAPQPADVAEYVGSDAARAISNVSDSVIPVFQSQAE
QLLSSSGLSAVHLLAKALAKAAGYTDIKKRSLLSSIESHVTLLLQAGKTIYSPAFAFGIL
RGFLPNEKIEGVKGLSLTADGMGAVFDVPADDVNAFTGGQENANMATIEVLKSLPPLQCK
DQSRGGDKRRGRFGGGRFSGGRGGNGNSGRRNGGGHGKGDGGGRNRFNKRR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttctcctctcctccccctcggagctagatgacctcaataagttgaagcac
aaaaagtccaaaaaggcggcatccatggccgccgacctcgacctgaacggctccgtagaa
gaggagaagaagagcaagaagaaaaagaagaacaagaacctcgaatccgaggacggggag
atctacaacagcgacggcgaaggctcggagaagaagattagcaagaagaagagaaaggct
tctgatgaagagaggagcgacaccatctccgacgcggcggcgagggcgaacggttctgct
ttgaagaagccgaaactcaggaagaatgatgaggatgaggaggtgatcgcgagaggagag
aacgagggtgctgcgaacccgaatgcggtgtccaaattcaggatatcgaaggtcctgagg
gagaagttgaagtccaagggaattgagtcgctgttccctattcaggcgatgaccttcgat
tccatacttgatgggtctgatttggtcggccgggcacggaccggtcagggtaaaaccttg
gcctttgtgcttccaattttggagtctttgacaaatgggcagtacaagacagctaggaaa
actggttgtggaaggcctccgagtgtcttggtgcttctgccaactagagagcttgcaaat
caggtgtatgcagactttcaggcttatggtggtgcagtggggttgtcttcatgctgttta
tatggaggatctccttaccgtgctcaagtacttgctctgaaacgggggattgatatagtt
gttggaacacctgggcggataaaggatcatatagagaggggaactcttgatctaaaattt
ttgaaattccgtatccttgatgaagctgatgaaatgttgaatatgggctttgttgatgat
gtcgaactaattcttggtaaggttgaggatgtcaataaagtccaaacacttctctttagt
gctaccctgcctgattgggtgaagaagatctctgcaaggtttctgaaacctgataagaaa
actgctgatcttgttggcaatgagaagctgaaggctagtgctagtgttagacatcttgtt
cttccctgtacgcgtcaagcaagagcacaaattattccagatattatccactgttatagc
tgtggaggccgtacgattatttttaccgagacaaaggaatctgcatctcaacttgctgga
ttgttacctgggtcaagggctttgcatggagatatagtgcaagctcaacgggaagttgta
cttgctggatttaggaaaggcaggtttttggttttggtggccacaaacgtggccgcacgt
ggcttagacatccacgatgtgcagttgattattcagtgtgagcccccacgtgatgttgaa
gcctacattcatcgttcagggcgaactgggagggcaggcaatactggagttgctatattg
ctatatgagcccagatattcatctagtatttctagattagaaagagaatcaggcgtcaaa
tttgagcacatctctgctccgcaacctgctgatgttgctgaatatgttggttctgatgca
gctagagctatctcaaatgtctctgacagcgtgattccagtttttcagtcacaagcagag
caacttttgagctcctctggtttatcagctgtgcatttgcttgcaaaagcactggcaaag
gctgcaggatacactgacataaaaaaaagatcactgctctcttctattgagagccatgta
accctacttcttcaggcaggaaagacaatctactcaccagcgtttgcttttggtatattg
agaggatttttgcctaatgaaaagattgaaggggtgaagggcctttctcttacagctgat
ggaatgggggcagtgtttgatgtgcctgctgatgatgtgaatgcatttactggaggtcaa
gaaaatgctaacatggcaaccattgaggtcttgaaaagcttgcctcctttgcaatgtaaa
gatcagtccagaggtggtgacaaaagacgaggtaggtttggtggtggcagattctctggt
gggagaggtggcaatggaaactcgggcagaagaaatggagggggtcatgggaagggagat
ggtgggggcagaaacaggttcaacaagaggaggtaa
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