Elaeis guineensis (African oil palm): 105059352
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Entry
105059352 CDS
T03921
Name
(RefSeq) exosome complex component RRP45A isoform X1
KO
K03678
exosome complex component RRP45
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105059352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105059352
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105059352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105059352
NCBI-ProteinID:
XP_073106094
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Position
16:29942434..29952996
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AA seq
447 aa
AA seq
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MEQRLANIGRMTVNEKKFIETALLSDLRIDGRRPFDYRKLTIKFGRHDGSSEVQLGETHV
MGYVTSQLVQPYRDRPNEGTLAIFTEFSPMADPSFEAGRPGESAIELGRVIDRGLRESRA
VDMESLCVVAGKSVWAIRVDLHILDNGGNLIDAANIAALAALLTFRRPECTLGGENGQEV
IVHDPEVREPLPLIVHHLPVAVTFAIFGEGNIMVIDPTYKEEAVMGGRMTATLNSNGDVC
AVQKAGGEGIMSSVIMQCLRIASVKAADITSKIKNAVDAYNTERALRKVKRHPPSVALEV
CVPDVIMEENQVDELSRHEVQNLKDEPERGCGNDGSRIGVETSTTRGKNNVFIGGPSSWD
PYSKGISSCFISSQDLPGPLKLAKEQEEAKISQNSIESHLGATNTGSSGPVGASVVSQQA
NSPKSLKDAVKPKHRKKNKASSASDMS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcgattagcgaatattgggcggatgactgtcaatgagaagaagttcatagag
accgctcttctttccgacctcagaattgacggccgccggccttttgattaccgtaaactc
accatcaagttcgggaggcacgatggttcatcagaggtgcagcttggtgagacacatgtc
atgggctatgtgacttctcaactggtgcaaccttatcgagataggccaaatgaaggaaca
cttgccatatttaccgaattttcgcccatggccgatccttcatttgaggcagggcgccca
ggggagtctgcaatagaactagggcgtgttatagaccgtggtcttagggagagcagagct
gtggatatggaatccttatgtgttgttgcagggaaatctgtatgggccatccgtgtggac
cttcacattcttgacaatggaggcaatctcattgatgctgctaatatcgctgctttggct
gctctcttgacatttcgaaggcctgaatgtacactaggaggagaaaatggtcaggaagtt
attgttcatgatcctgaggttagggaaccactccctttaatagtccatcatcttcctgtg
gcagtaacttttgcaatctttggcgaaggaaacatcatggtgatagatccaacttacaag
gaagaggctgttatgggaggaaggatgactgctacattgaactcaaatggggatgtttgt
gctgttcaaaaggctggaggagagggtatcatgtcaagtgtaatcatgcagtgtttgcgg
atagcctctgttaaagctgctgacatcacaagcaaaattaagaatgcagtagatgcatac
aacactgaaagagcattgcgaaaagtaaagcgtcatccgccatcggttgcacttgaagtc
tgtgtaccagatgttataatggaggagaaccaagttgatgagttaagtagacatgaagtg
cagaatttaaaagatgagccagagagaggctgtggtaatgatggtagtagaattggagtt
gaaactagtactactagaggaaaaaataacgtattcattggtggcccgtcaagctgggat
ccatactcaaagggtatttcatcatgttttattagttctcaagatttacctgggccttta
aagttggctaaggaacaagaggaagcaaaaatcagtcaaaattcaattgaatctcatctc
ggggcaacaaatactgggagttctggtcctgttggagcctcggttgtgagccagcaagct
aactctcccaagagtctgaaagatgctgtgaagcccaaacataggaagaaaaataaagca
tcctcggctagtgacatgagctag
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