Elaeis guineensis (African oil palm): 105059546
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Entry
105059546 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: protein LHY-like
KO
K12133
MYB-related transcription factor LHY
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105059546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egu03000
]
105059546
Transcription factors [BR:
egu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
105059546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105059546
NCBI-ProteinID:
XP_010941176
UniProt:
A0A6I9SDF1
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Position
16:18406350..18468152
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AA seq
799 aa
AA seq
DB search
MRYYFRQIERVVGDMEGGSLLFVDDLNSKXDLWLFSCACSAEIWSLEMEANSLRKDLVVK
TRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLE
KEAVLKGSPPGQAHDIDIPPPRPKRKPSTPYPRKSWVGSVSPTGDAMNDKSSKSVSLVST
NKQVWDMGSDTPQKKFAATLTLQKRVVSEDGSCSEVLNFFQDASSASISSVNNSSSNPHM
EFVPKMKEIKETTRDKSSVSVEVNKDININVTAYMAQEIQRPERFHIDSQANLDHEKGAD
TSKQQDSLGSLLRDNMQSNYSNSKHVPVHLLDKNSEEVEQTTDSDVHNFTAVPGQVGGVH
ENSKSFINPMVSATPKLHNSSAMPCIHQPFPALPPFAISHGNQDAYRSFLNISSPFSSLI
MSTLLQNPAVHAAASLAASFWPSADVDSSTNSTPETQSGGFPLRHMNHSPSLASITAATV
AAASAWWATQGLSPLFPPPHIGFTFNPPAATTIPTVATAQAPEYETEGKEGAFQNLVAED
QVGNPAQSMDLNTRHASPKSSSSSEAGDSDNSGSGERSHCTELKASRTNKFKPLTATGFN
DHDKTKSNKKTDRSSCGSNTPSSSEVETNTILDKHEKFDDEAKQAYFSNPLAAQTNNRRS
RSNGTINESWKEVSEEGRLAFQALFSREVLPQSFSPPHAEDTMAKENEAVTLPVDLNKAC
ETTDLNHLHGFTKEMSNRSNDNTGKGSLTSEIGQGKLKSRRTGFKPYKRCSMEAKENRTA
AVEETANKRVRLEGEASTR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaggtactatttccggcaaatagagcgagtggtaggagacatggagggaggatcgctg
ctgtttgtggatgatttgaactcgaagnntgatctgtggttattttcttgtgcttgctct
gccgaaatttggagtttggaaatggaagcaaattccttgaggaaagacttggttgtgaag
actaggaagccttacacgatcacaaagcagcgagagaggtggacagaggaggagcataac
aggttccttgaagctctgaaattgtatgggagagcttggcagcgtattgaagagcatata
ggaacaaagacagctgtgcagattaggagtcatgcacaaaaattcttcacaaagttggaa
aaagaagctgtgctgaagggcagtcctccaggacaagctcatgacattgatattcctccc
ccaagacctaaaaggaaaccaagcactccatatcctcggaagagttgggttggttctgtc
tctccaactggggatgcaatgaatgacaaatcatcaaaatctgtttctcttgtgagcacc
aataaacaagtctgggacatgggaagtgatacacctcaaaagaaatttgctgcaacttta
acattgcaaaagagagtggtttctgaagacggaagctgctcagaagttcttaacttcttt
caagatgcttcgtctgcttccatctcttctgtgaacaacagctcttcaaatcctcacatg
gaatttgtgcccaagatgaaagaaataaaggagactacaagagacaaatcttctgtctct
gttgaagtgaataaggatataaacataaatgtgacagcctatatggctcaggaaattcaa
agacctgaaagatttcacatagattcacaagcaaatttagatcatgaaaagggtgcagat
acatcaaagcagcaagatagccttggttcattattaagggacaatatgcaaagcaattat
agcaattcaaaacatgttcctgtgcatttattagacaaaaatagtgaagaagtcgagcag
acaacagactctgatgtacataatttcacagcagttcctggccaagtgggaggagtgcat
gagaattccaagtcattcatcaatcctatggtttctgccacaccaaagctccacaacagt
tctgcaatgccttgtattcaccaaccatttcctgccttgccaccctttgccatatcccac
ggcaatcaagatgcttataggtcattcctcaacatctcatcccccttctctagtctcatc
atgtctaccttattacaaaatccagcagttcatgcagcagccagcctggcagcatcattc
tggccatctgcagatgtggattcttctaccaactcaactccagaaacccaatctggggga
tttccattaaggcacatgaaccattctccaagcctggcatctatcactgctgctacagtt
gcagctgcatcagcatggtgggcaactcaggggctatcgccattattcccacctcctcac
attggtttcacatttaatccaccagctgcaaccacaattcccacagtggccacagctcag
gctccagaatatgagacagaaggaaaagaaggcgcatttcagaatcttgtagcagaagat
caagttggaaatccagctcaatctatggatttaaatacacgacatgcttctcctaaatca
tcatcatcgtcagaagcaggggattcagataacagtggaagtggtgaaagatcacattgc
acagagctcaaagcttctagaactaacaagtttaaaccattaacagcaactggatttaat
gatcatgataagacaaagagcaataagaaaactgatcgttcttcatgtggctccaataca
ccttcaagcagtgaagttgaaacaaataccatactggataagcatgagaaattcgacgat
gaagctaaacaagcctatttcagtaatcctttagctgcccagactaacaatcgcagatct
cgaagcaatgggaccattaatgagtcgtggaaagaagtctctgaggagggtcgacttgcc
ttccaagcactcttcagtagagaagtgctgccacaaagcttttcacctccacatgctgaa
gatacaatggccaaagagaatgaagctgttaccttgccagtcgatcttaacaaggcatgt
gaaacaaccgatctcaatcatcttcatggctttacaaaggagatgtcaaacagaagcaat
gacaacaccggaaaaggttctttgacaagtgaaattggtcaggggaagctgaagtctcgt
cgaacaggattcaagccttataaaaggtgttcaatggaagctaaggaaaacaggacagca
gctgttgaagagactgctaacaagagggtacgtcttgaaggggaagcttcaaccagatag
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