Elaeis guineensis (African oil palm): 105059948
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Entry
105059948 CDS
T03921
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105059948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105059948
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105059948
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
F-box-like
LRR_4
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
105059948
NCBI-ProteinID:
XP_010941793
UniProt:
A0A6I9SD78
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Position
10:26754244..26759103
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AA seq
580 aa
AA seq
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MPAGGRWAVMFPDEVWEHIFSFVADDRDRNAVSLVCSGWYRIERRSRRRIFVGNCYAISP
AAAVRRFPEVRAVSIKGKPHFADFNLVPSDWGGGAEAWVAAMAEGWPQLEELRLKRMVVT
DDCFELIARSFKNFRVLALSSCEGFSTAGLAAIAANCRNLREIDLHENEVEDNSVHWLSH
FPESFTSLVNLNIACLEGEVNVCVLERLVSRCTNLKTLKLNHAVPLDRLVNLLHRAPQLA
DLGTGRFSAEYRAELFSKLESAFASCKSMKSISGIFEAVPAYIPAIYSVCNGLTSLNLSY
ATIQSPDLIKLVSRCKNLQRLWVMDLIEDNGLAAVASSCKRLQELRVFPSDPFGAAQPVS
LTEHGLVTVSVGCPMLQSVLYFCRQMTNAALFTVARNRPNLMCFRLCIIDPHTPDYNTLE
PLDVGFSAIVESCKDLRRLSLSGLLTDNVFRSIGAFADRLEMLSVAFAGNSDAGLHYILS
GCKSLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSLGACKLLAQKMPWLNVEVI
DEWRGGLWDSRPDDCPVEKLYVYRTVAGPRSDTPPCVWTV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccggtggacggtgggccgtcatgttccctgacgaggtctgggagcacatcttc
tccttcgtcgctgacgaccgcgaccgcaacgccgtctccctcgtctgtagcggctggtac
cgtatcgagcgccgctcccgccgccggatcttcgttggcaactgctacgctatctccccc
gccgccgccgtccgccgcttccccgaggtccgggccgtctccatcaagggcaagccccac
ttcgctgacttcaacctcgtacccagcgactggggcggtggggctgaggcttgggtcgcc
gccatggccgaagggtggccgcagctcgaggagctccgcctcaagcggatggtcgtcacc
gacgactgcttcgagctcattgcccgatcgttcaagaactttagagtcctcgcgctttcc
tcctgcgaggggttcagcaccgccggcctcgccgcaatcgccgccaattgcagaaatcta
agggagattgacttacatgaaaatgaagtagaggataattctgtgcactggctcagccat
tttcctgaatctttcacttctttggtaaatttgaacattgcttgcttggaaggggaggtg
aatgtctgtgtccttgagcgccttgtgagcagatgcaccaacctcaagaccctcaagctc
aaccatgctgtgcctcttgataggcttgtcaacctcctgcacagggccccgcagctggct
gaccttggaactggcaggttctctgcagaatatcgtgcagagctcttctccaagcttgaa
tcagcctttgcaagctgtaagagcatgaagagcatatctgggatcttcgaagctgttcca
gcatatatcccagcaatctactcagtctgtaatggcctcacatctctgaatttaagttat
gctaccattcagagccctgacctcatcaagctagtcagccggtgcaagaatctccaacga
ttatgggtaatggacttgattgaggataatggtctagctgctgtggcatcatcttgtaag
cggcttcaagaactgcgtgtcttcccttctgatccttttggtgcagcacagcctgtttct
ctcactgagcatggccttgtcactgtctctgtgggatgtccaatgctccagtcagtcctc
tacttctgccgacaaatgacgaatgctgctctcttcactgttgccaggaatcgtcccaat
cttatgtgctttcgtctatgcatcattgatccccacacacctgactataacactctagag
ccactagatgtaggctttagtgccatcgtagaatcttgcaaggatctcaggcgtctctcc
ctctcgggtctcctcaccgacaatgtgtttagatccattggggccttcgcagatcgcctt
gagatgctctcggttgcatttgctgggaatagtgatgctggtctccattacattctctca
ggctgcaagagcttacgaaagctggaaatcagggactgcccatttggagacaaggctttg
ttggccaatgctgctaagctagagacaatgcgatccctttggatgtcgtcatgctctgtg
agcttgggagcatgcaagttgctggcccagaagatgccatggcttaacgtggaggttatc
gatgagtggagaggagggttatgggattcacggcccgatgattgccctgttgagaagctc
tatgtttaccggacagttgctgggccaagatctgacacaccaccttgcgtctggacggta
taa
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