Elaeis guineensis (African oil palm): 105060565
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Entry
105060565 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105060565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egu04131
]
105060565
Membrane trafficking [BR:
egu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105060565
Hops complex
105060565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
105060565
NCBI-ProteinID:
XP_010942636
UniProt:
A0A6I9SGT8
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Position
13:complement(4367573..4379930)
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AA seq
956 aa
AA seq
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MYQWRKFEFFEEKSAGKASIPGEITGQILCCSSGRGRIAVGCDDGTVGLLDRGFKLSYGF
QAHASSVLFIQQLKQRNFLVTIGEDEQTSPQLSSTCLKVFDLDKIEPEGSSTTTPLCVQI
LRIFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGSIYCIKGDVARERITRFRLQVEAVS
DNSLFSIMGLGFRVEGRSLQLFAVTPSSISLFSLHDQPPKRQTLDQIGCDANAVTMNDRL
DLIIGRPEAVYFYEVDGRGPCWAFDGEKKFLGWFRGYLLCVIADQRSSNNTLNVYDLKNR
LIAHSMVVGEVSHLLCEWGFIILIMSDRKILCIAEKDMESKLDMLFKKNLYTVAINLVQS
QQADAASTAEVLRKYGDHLYGRQDYDEAMSQYINTIGHLEPSYVIQKFLDAQRIHNLTNY
LEKLHERGLASKDHTTLLLNCYTKLKDVEKLNKFIKDEDAVGEHKFDVETAIRVCRAGGY
HEHALYVAKKAERHEWYLKILLEDLGRYHEALQYIQALSPXEAGVTVKEYGKILVEHRPA
ETVDILLRLCTDGGESTTRRTSSSMHLLMLPSPMDFINIFVHSPQSLMDFLERYISKVND
SPAQVEIHNTLLELYLSDTLNFPSVSQVNGGEDRDLKVTSAREVANGSVKKNMEKYTVEN
KDVVKEKDCLERQQKGLTLLKNAWTSDMEQPLYDADLAVILCEMNKFKDGLLFLYEKMKL
YKEVVACYMQAHDHDGLIMCCKKLGDSTHGGDPSLWGDLLKYFGELGEDCSKEVKEVLTY
IERDDILPPIVVLQTLSRNPSLTLSVVKDYIARKLEQETKLIEDDRKSIEKYQEDTASMR
KEIHDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRSI
LETKRNLEQNARDQNWFFQQLKNSKDGFSVIADYFGKGVVSKTSTDPPQVPSSGST
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaagttcgagttcttcgaggagaagtccgccgggaaggcctcgatc
cccggcgagatcaccggccagatcctgtgctgctcgagcgggagggggcggatcgccgtc
ggatgcgatgatggcaccgtcggcctcctcgaccgcggcttcaagctctcctacggcttc
caagcccacgcctcctccgtcctcttcatccagcagctcaagcaacgcaatttcctagta
accattggagaagatgagcagacgtctccccagctatcttcaacttgcttaaaagtgttt
gaccttgataagattgagccagaaggttcaagcacgactactcctttatgtgtccaaata
ctgcggatattcaccaatcagtttcctgaagcaaagattacatcatttttagttcttgag
gaagctcctccaatattactgattgctattggtttagataatggttccatctactgcatc
aaaggtgacgttgcacgtgagcgtatcacacgcttcaggctgcaggttgaggctgtctca
gacaatagtctcttttctatcatgggtcttggtttccgagttgaagggagatctcttcaa
ctctttgctgtcactcctagttccataagtctgttcagcttgcatgaccaaccaccaaag
aggcagaccttggatcagattggatgtgatgctaatgctgttacaatgaatgatcgcctg
gatctaattattggtcgtcctgaagctgtgtacttttatgaagttgatgggcgaggtcct
tgttgggcttttgatggcgagaagaaatttcttggttggtttcgtggatacttactgtgt
gttattgcagatcagagaagcagcaataataccttgaatgtttatgatctgaagaatcgg
ttgattgcccatagcatggtggtcggtgaggtgtcacacttgctatgtgaatggggcttt
atcattcttataatgagtgacaggaagattctgtgcatagcagaaaaggacatggaaagt
aagttggatatgttgttcaagaagaatttgtatactgttgcaatcaaccttgtacagagt
caacaagcggatgctgcttccactgctgaagtgctgcgaaaatatggtgaccatttatat
ggtagacaagattatgatgaggctatgtcacaatatattaacacaattggtcatctggaa
ccttcttatgttatccagaagtttctagatgcacaaaggatccacaaccttactaattat
cttgaaaaattacatgagagaggcttggcttctaaagaccatacaactcttcttttaaac
tgctacacaaaattgaaagatgttgaaaagctaaacaagttcatcaaagatgaagatgct
gttggtgaacacaagtttgacgtggaaactgccataagagtgtgccgtgcaggtgggtat
catgagcatgctttatatgttgctaagaaagctgagagacatgagtggtatttaaagatt
ttacttgaagaccttggtagataccatgaggcattacagtatattcaagccttgagccca
nnggaagctggcgttacagtgaaagagtatggtaagattcttgtagaacacagaccagct
gaaactgttgatatactcttgagactctgcactgatggtggcgaatcaacaacaaggagg
acctcaagtagcatgcacttacttatgctgccttccccaatggactttataaatattttt
gtacatagcccacaatctctcatggacttcctagaaaggtatatcagtaaggtaaatgat
tcacctgctcaggttgaaattcacaacacccttttggagctatacctatctgacaccttg
aacttcccatcagtttcacaagtaaatggtggtgaagatcgtgatcttaaagtaacaagt
gctagagaagtggctaatgggtctgtgaagaagaacatggagaaatataccgttgagaac
aaagatgttgtaaaggaaaaggattgtctagaaagacagcagaagggtctaaccttgctt
aagaatgcatggacatctgacatggaacaaccgctgtatgatgctgatcttgctgttatt
ctttgtgaaatgaacaaattcaaagatggtctgttgttcctgtatgagaagatgaaactt
tataaagaagtggttgcttgctacatgcaggcccatgaccatgatggattgatcatgtgc
tgcaagaagctaggggattcaactcacgggggagatccatctctttggggtgatcttctc
aagtacttcggtgaacttggagaagattgctccaaagaagtaaaggaggtcttgacgtac
attgagagggatgatatattgcctcccatagttgttctacagacattatctaggaaccct
agcttgacactatctgttgtaaaggattacattgctcgaaagcttgaacaagaaacaaag
ctgattgaagatgaccgcaaatcaattgagaagtaccaggaagatactgcttcaatgagg
aaagaaatacatgatctcaggactaatgcaagaatttttcaacttagcaaatgtacagcc
tgcaccttcaccctcgatcttcctgcagtacattttatgtgcatgcactcattccaccta
cgctgccttggagacaacgagaaagaatgcccagagtgtgcaccagaatacagatccatt
ttagaaactaagagaaatttggagcaaaatgccagagaccaaaattggtttttccagcag
ttgaagaattcaaaggatggattttctgtgatagcagactattttggcaagggcgtagtg
agcaaaactagtactgatccaccacaagttccctcatcgggcagtacttaa
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