Elaeis guineensis (African oil palm): 105060636
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Entry
105060636 CDS
T03921
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04120
Ubiquitin mediated proteolysis
egu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105060636
04120 Ubiquitin mediated proteolysis
105060636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105060636
Enzymes [BR:
egu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105060636
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105060636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
FlxA
zf-ANAPC11
MscS_porin
zf-RING_16
zf-RING_5
zf-RING_11
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
105060636
NCBI-ProteinID:
XP_010942726
UniProt:
A0A6I9SF76
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All DBs
Position
16:23419087..23429150
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AA seq
545 aa
AA seq
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MVRLQTYAGFSFLATITAIYYAFNSRGQFYPAMVYLSTSKICFVLLLNMGLVIMCIMWQL
VKRLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLTMVTALLLIKALHWLA
QKRVEHIETTPSVPMLSHIRIVSFMVFLLVLDCLFLYNFLKSLIQTRQASVALFFSFEYT
ILATTTVSMFVKYVFYVSDMLMEGQWERKAVYTFYLELVRDLLHLSLYIFFFLVIFLNYG
IPLHLIRELYETFRNFRIRVADYIRYRKITSNMNERFPDATPEELNVSDATCIICREEMV
TAKKLLCGHLFHVHCLRSWLERQHTCPTCRALVVPPENRPAGSRQHGTPTEFHQTGPAVA
GTSTQDPDSSAVGDNISQHQARLRAAALAASLYEKSFAPTNTFVWSSDYALQPQMIILEM
EKQSTGEEAPSGQPPPYQPSFQSQYTLTSMPPGSSVIFHQNSAGNPDLQRSLLKAQENLI
QSQIEFLQARLQILQQQQKADHEVNSGDAVPAATDYKGKAVAASNSSASIADCGQHGETE
DADTD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctccaaacatatgctgggttcagtttcctggccaccattacagcaatatat
tatgcatttaacagcagagggcaattttatccagctatggtgtatctctccacttcaaag
atctgttttgtgcttcttttaaacatgggtctggtcatcatgtgtataatgtggcagcta
gtcaagcgtttgtttcttggttctctaagagaagcagaagttgagaggctgaatgaacaa
tcatggagggaggtcatggagatcctttttgctatcaccatattccggcaagatttttct
gtatcttttcttacaatggtcactgcccttctattgatcaaagccttgcactggttggct
caaaagagagttgaacatattgagacaactccatctgtacctatgctgtctcacatacgc
atagtatctttcatggtgtttcttcttgttctggattgtcttttcttatataattttttg
aagtccttgatacagacacggcaagcatcggttgctctcttcttttcatttgaatataca
attctagcaacaacaactgtgtcaatgtttgtcaaatatgttttctatgtgagtgacatg
cttatggaagggcagtgggaaaggaaggctgtttatactttttacctggaacttgttcga
gaccttcttcacctgtctctatatatatttttcttcctagtcattttcttgaactatggt
atcccattgcacttgatccgtgagctctatgagacattccgcaatttcagaattcgtgtt
gctgattatatccgttatcgcaaaatcacatcgaatatgaatgaacgtttcccagatgca
acaccagaggagcttaatgtaagcgatgcgacatgcattatatgccgtgaggagatggtg
acagccaaaaagttgctctgtggacacctttttcatgtgcattgtctgagatcttggtta
gagcggcagcatacttgccctacatgcagagccttggttgttccccctgaaaacaggcca
gctggatctcgccaacatggaactccaaccgaatttcatcagactggaccagcagtggct
ggcacatctactcaggaccccgacagcagtgcagtgggtgacaatataagtcagcaccag
gcaaggcttcgagctgctgccttggctgcttcattatatgagaagtcatttgctccaaca
aacacatttgtctggtcttcagattacgctttgcagccccagatgattattctagagatg
gagaagcaatcaactggtgaagaagcaccgtctggacaaccgccgccataccaaccttcc
tttcaaagtcaatacactttgacatccatgcctcctggctctagtgttatcttccatcag
aattctgctggcaatcctgacctacaacgttcactattgaaggcgcaggaaaatcttatt
cagagtcagattgagtttctgcaagcccggttgcaaattctacagcagcagcagaaggcg
gatcatgaggtaaacagtggagatgcagttcccgctgccactgattacaagggaaaggct
gttgctgcatcaaattcttctgcatctatagctgattgtggtcaacatggggagaccgaa
gatgctgacacggattaa
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