Elaeis guineensis (African oil palm): 105060780
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Entry
105060780 CDS
T03921
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105060780
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
105060780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IP5PC_F
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Vps41
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_EIPR1
BetaGal_dom2
Nucleoporin_N
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
105060780
NCBI-ProteinID:
XP_010942920
UniProt:
A0A6I9SFK0
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Position
1:99610350..99613335
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AA seq
410 aa
AA seq
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MASFWREVILTSYPDKPITAHDPLTGTMLAHFSGSHSPRKGLTLAGNTLIAASHISATAA
GFIKLYNWWSSTALYCIQAPEPVAPLAATPDGSYLFSGGLSGCIHAFSLPSGDLCRSFQA
HHQPVSCLIVNDDGSLLISGGDDGTIAIFPILRLLDDASNEDDPAQLALSQFSAHDLPVT
CIVAGPGGCNATVVSSSLDCTFKLWSLADGVKLRTVQFPCAIWCVAADPSSSEVYAGGSD
GRIYVVPLKVGGRKLRHTGAEVTAWEAEQNGAVMAVAMANGHQNLVSASEDGIIKIWDME
SRSVVRIIGREGGALSDLIVVKGINVNNGARRGDEVLPSNGRFCEREMGRNVNELREMDE
CLSVAVKDRRRAIDKLEAVIDIYKRLLGLLLKEAKRENGKEEANKMDYFM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttttggagagaggtcatcctcaccagctaccctgacaagcccatcacagcg
catgaccctctcaccggcaccatgcttgcccacttctccggcagccactcccctcgcaaa
gggctcaccctcgctggcaacacactgattgctgcctcgcacatttcagccactgctgca
ggcttcatcaaactctacaactggtggtcctccactgctctctactgcatccaggcccct
gaaccagttgctccccttgctgccactccagatggctcctaccttttctctggaggcctc
tctggctgcatccatgccttctctcttccctccggtgatctgtgccgctcgtttcaggca
caccaccagcctgtgtcatgtctcatcgtcaatgatgatggctctctactaatatcgggt
ggcgatgatggtaccatagcaattttcccaatccttcgacttctagatgatgcctctaat
gaggatgatcctgcccaacttgcattgagccaattctctgcgcatgatttgccggtgaca
tgcattgttgcagggccaggtggatgcaatgcaactgtagtttcaagctcacttgattgc
acttttaagctttggagcctggcagatggtgtcaagctaagaactgtgcaattcccatgt
gcaatttggtgtgttgctgcggatcctagtagttctgaggtctatgctggtggatcagat
gggaggatatatgttgtaccactaaaagtaggaggaagaaagctgcgacatactggagca
gaggtaacagcatgggaagcagagcagaatggggcagtgatggcagtggcaatggcaaac
gggcatcagaacttggtatcagcttcagaagatgggatcataaaaatttgggacatggag
agcagatcagtggttcggattattggacgtgaggggggcgcccttagcgatcttatagtg
gtgaaagggatcaatgtgaacaatggagctcgaaggggagatgaagttcttccatccaat
gggcggttttgtgagagggagatgggtagaaatgttaacgagctcagagagatggatgaa
tgcttgagtgtagcagtgaaggacaggaggagggccattgacaagcttgaggctgtgata
gacatctacaagaggctcctggggctccttctcaaagaagctaagagagaaaatggtaaa
gaggaagccaacaagatggattactttatgtaa
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