Elaeis guineensis (African oil palm): 105060877
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Entry
105060877 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105060877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105060877
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105060877
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
105060877
NCBI-ProteinID:
XP_073104192
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All DBs
Position
13:1817469..1844692
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AA seq
981 aa
AA seq
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MVSRREDDEEEEXEEVTEISSDSNPKGEESEDYDEEDGEDVEADRDEDEEESEKEWRFSE
SPPSDQERKSQNIAALVRGNLLVRRQPLIPRILSVSDGAAVARKPFKPPCPKAYKDNNEE
LTRRLWARKRFVPWGSQRPSLVAICNLLHTPSVSNDDPSEENQCLPPGIEPLILWQSGGS
DVGSSNFVQIEVDPLLVRYLRPHQREGVQFMFDCVSGLSSSDGISGCILADDMGLGKTLQ
SITVLYTLLRRGFDGMPMVKKAMIVTPTSLVSNWESEINKWIGGKVQLLALCESTRADVL
SGIESFLKPCSPFQVLIISYETFRMHSAKFEKSGSCDLLICDEAHRLKNDQTLTNRALAA
LPCKRRILLSGTPMQNDLEEFFAMVNFTNPGVLGDATYFRRYYETPIICGREPMATIEEK
KLGAERSADLSLKVNQFILRRXNTLLSNHLPPKIVEVVCCKLTPLQLELYNHFVQSKNVK
HVIAEEAKQSKILAYITALKKLCNHPKLIYDTIKTGSSGTSGFDDCMRFFPPELFSGRSG
SWTGGGGMWVELSGKMHVLARLLGHLRQKTGDRIVLVSNYTQTLDLFAQLCRERRYPYLR
LDGTTSIGKRQKLVNRFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLILFDPDWNPANDKQ
AAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQIDNQMQKGNFLST
EDLRDLFTFHENVRSEIHENMNCTRCKTDNLMSVNRDGNEIEPNDDKYSTDKGYQANQVV
DDIGGFAEIAGCLHKLKSSEKQLGAPSEEDLGSWGHHSDPMTVPDAILQSSAGDEITFVF
TNQVDGKLVPVDSAVKPTNQQLNEPKDSKQKDEKSPYSYQQLRSQPSTSDENCNRKSPML
STPFLNRPTKLMRAPPNSMPALKQPNTSWERERESCFQITIPLSRLFMGLPSYLLAVICL
EPISFVEDGLRSKVAKVNQHV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgaggagagaagacgacgaagaggaggagnaagaagaagtaaccgagatttcc
tccgattctaatccgaaaggcgaggaaagcgaggactacgacgaagaggacggagaagat
gtagaagccgatcgagacgaagacgaagaggaaagcgagaaagaatggcgtttttccgaa
tccccaccgtccgatcaagagcggaagtcccagaacatagccgctctcgtcagaggaaac
cttcttgtaagaagacagccacttattccacgaatactgtcagtttctgatggagcagca
gtagctagaaagccatttaagccaccatgcccaaaggcatataaagataataatgaagaa
ctcactcgccgcctttgggcacgtaaaaggtttgttccatggggttcccagaggccatct
ttggttgctatatgcaaccttctacatacccctagtgtttccaatgatgatccttcagaa
gagaatcagtgtctgccacctgggattgagcctttgatcttatggcaatctggaggatca
gatgtgggaagtagcaattttgtgcagattgaggtagatccactacttgttcgttatctt
cgacctcatcaaagagaaggggttcaatttatgtttgactgcgtttctggtttatccagt
tctgatggtatttctgggtgcattctagcagatgatatgggattgggtaagactctacag
tcaattactgtgctgtataccctcctccgtcggggctttgatggcatgccaatggttaag
aaggctatgattgtaactcctacaagccttgttagtaattgggaatctgagattaataag
tggattggtggaaaagttcagctacttgctctatgtgaaagcacaagggcagatgtcctg
tccgggatcgaaagtttcttaaaaccctgcagtccttttcaggtgctcatcatatcttat
gagacatttcgaatgcactcagcaaaatttgaaaagagtggaagctgtgacctccttata
tgtgatgaagctcacagactgaagaatgaccaaacattgacaaatcgagcattggctgct
cttccttgtaaacggcgtatcttattgtccggaacccctatgcagaatgatctggaggaa
ttctttgctatggtgaattttacaaatcctggagttctaggggatgcaacatacttccgt
agatactatgagacaccaatcatctgtgggagagagcctatggcgaccatagaagaaaag
aagttgggtgctgagaggtctgcagatctaagtttaaaagtaaaccagtttatattgagg
aggnacaacacattgttgtcaaatcacctaccaccaaagatagtggaagtggtttgttgc
aagttgactcctctgcaacttgaattgtataaccatttcgtgcaatccaaaaatgtaaag
catgtcatagctgaagaggcaaagcaatcaaaaattttagcatacattactgctcttaaa
aagctatgcaaccatccaaagctcatttatgacactattaaaactggaagttcaggaaca
tcaggttttgatgattgcatgcgcttttttcctccagagctattttctgggagatctgga
tcttggactggtggtggtggaatgtgggtagaactgtcagggaaaatgcatgtcttagct
cgattactgggccatctccgacagaaaactggtgaccgaatcgttcttgtatcaaattac
actcagacattggatctttttgctcaattgtgccgggaaagaaggtacccatatctgagg
cttgatgggactacatcgatcggtaaaaggcaaaagttggtcaaccgtttcaatgatcca
tctaaagatgagtttgtatttctcttaagtagcaaggctggtggttgtggacttaatctg
attggtggaaatcgcttgatcctctttgatcctgactggaaccctgcgaatgacaagcag
gctgcagcaagagtctggagggatggtcagaagaagcgagtctacatatataggttctta
agcactggaaccattgaagaaaaggtgtaccagcgtcaaatgtcaaaagaaggccttcaa
aaagttattcagcaggaacaaatagacaatcagatgcaaaaaggtaattttctttcaaca
gaagacttgcgtgatcttttcacatttcatgaaaatgtcaggtctgagattcatgaaaac
atgaattgcacccgttgcaaaacagataatctaatgtcagtgaatcgtgatggtaatgag
atagagcctaatgacgataaatattcaactgacaaaggctatcaggccaatcaagtggtt
gatgatattggcgggtttgcagaaattgctggatgcctgcacaaattaaaaagctcagag
aaacagcttggagccccgtctgaagaggatcttggaagttggggtcatcattctgaccca
atgactgtgcctgatgcaattcttcaatcttcggctggtgatgagatcacttttgttttc
accaatcaagttgacgggaaacttgtaccagttgattcagcagtaaaaccgaccaatcaa
cagttgaatgaaccaaaagactccaagcaaaaagatgaaaaatccccgtactcctaccag
caacttagatcgcaaccttcaacatctgatgaaaactgtaacaggaagagtcctatgtta
agcacaccctttttgaatagacctactaagttgatgagggcaccaccaaatagtatgcct
gcactgaagcaacccaacacctcttgggagagagagagagagagttgttttcagatcacc
attccattaagtagattgttcatgggcctaccttcgtatctgctggctgtcatctgtctc
gaacctatttcttttgtcgaagatggtttgaggagcaaagttgccaaggtgaatcagcat
gtctga
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