KEGG   Elaeis guineensis (African oil palm): 105060909
Entry
105060909         CDS       T03921                                 
Name
(RefSeq) THO complex subunit 5A
  KO
K13174  THO complex subunit 5
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03013  Nucleocytoplasmic transport
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105060909
  09122 Translation
   03013 Nucleocytoplasmic transport
    105060909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105060909
   03041 Spliceosome [BR:egu03041]
    105060909
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105060909
Spliceosome [BR:egu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105060909
SSDB
Motif
Pfam: FmiP_Thoc5 RWD
Other DBs
NCBI-GeneID: 105060909
NCBI-ProteinID: XP_010943078
UniProt: A0A6I9SGU7
LinkDB
Position
13:779896..789289
AA seq 787 aa
MQAMEVEAIPNSKRSPHDVLEETRTAMEEIAAKMLFIKKDGRPKSDLRELITQMSLLLLS
LRQVNRSILMEEDRVKVETESAKAPVDFTTLQLHNLMYEKNHYLKAIKACKDFRSKYPDI
DLVSEEEFFRSAPEDIKGKVLASDAAHDLMLKRLNFELYQRKELYKLHEKLEQHKKSLLD
TIANRKKFLSSLPSHLKSLKKATLPVQQQLGILHTKKLKQHHAAELLPPPLYIVYSQLLA
QKEAFGERIEMEILGSVKDAQIFAQQQANKDSGLSSNTENNRLEEDAPDEEEDVQRRRKR
PKRNQVKENIDQAGVCQIHPLKIILHIYDDEESEAKPSKLITLRFEYLVKLNVACVGVED
SEEGSDNNILCNLFPDDTGIELPHQAAKLYAGDSLAFGERRASRPYKWAQHLAGIDFLPE
VPPLHECNEALSSEALKGLDVAAGLSIYRHQNRVQTILQRIRSRKKAQMALVEQLDSLMK
LRWPLLAYGDIPWALHDPLCTLQNCSSSELIPDSSSFSAVVVGQVAHVIDLDLDRRSVTS
WEVESAREDGELPTALPAANSPDDSKVTMANGSSEHVEHSRSLALITKSVTPSKKVKSRV
LRKSEDDLELILDSDSELEEHTCIDQEIENVRVGKPWEDHAAKEFTLILTRTYENERNAK
LNAKVKISTEYPLRPPLFTLSLLSDGPQGFEWYNELRAMEAEVNLHIIKVLPLEHENYIL
AHQIRCLAMLFDFHFDARHEKRKSTSIIDVGLCKPVSGTILARSVRGRDRRKMISWKGMG
CTPGYPC
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgcaggcgatggaggtggaggcgatccccaactccaagcgttctcctcacgacgttctc
gaggagacccgcacggcgatggaggagatcgccgcgaaaatgctcttcatcaagaaagat
ggccgccccaagtccgacctccgcgagctcatcacccagatgtccctcctcttgctctcc
ctccgccaggtaaatcgatcgatattgatggaagaggaccgggtgaaggtggagacggag
agcgcaaaggctccggttgacttcaccaccctccagctccacaaccttatgtacgagaag
aatcattacttgaaggccatcaaggcttgcaaagatttccgatccaagtatccggacatt
gacctcgtctccgaggaggagttcttccgttccgcgcccgaggacattaaagggaaggtc
ttggcgagcgatgccgcgcatgatttaatgttgaagaggctcaattttgagctctaccag
agaaaggagctgtacaaacttcatgagaaattggaacagcataaaaaaagtcttctggat
accatagcaaaccggaaaaagttcctctcaagtctcccatcacatctgaaatctctgaag
aaagcaaccttaccagtacagcagcaattagggattttgcataccaagaagctaaagcag
caccatgcagcagagttacttccacctcctctttatatagtctactcacagctactggct
cagaaagaagcatttggagagaggattgaaatggagatattaggaagtgtaaaggatgct
caaatttttgctcaacaacaagctaacaaagacagcggcttatcatcgaatactgaaaac
aataggttggaagaggatgcacctgatgaggaggaagatgtccagagaagaagaaagagg
ccaaagaggaaccaggtcaaggagaatattgatcaagcaggagtgtgccagattcatcca
ctcaagatcattcttcatatatatgatgatgaagagtctgaggctaaaccttcaaaatta
atcactctgagatttgagtacttggtaaagctaaacgttgcatgtgttggagtagaagat
tcagaggaaggatctgacaacaatatcttatgtaacttatttcctgatgatactggcatt
gagcttccccaccaggcagctaaactttatgctggggattcattagcatttggtgaaaga
agagcttcacgtccatacaaatgggcacaacatctagctggaattgattttttgccagag
gtgcctcctctgcatgagtgcaatgaagctttgagcagtgaagctttgaaaggtttagat
gttgcagctggacttagtatataccgtcatcagaaccgtgtgcagaccattttgcaaagg
attcgctccaggaaaaaggctcaaatggctcttgtggagcagcttgattccttgatgaag
ctcaggtggcccttactagcctatggagacattccatgggctttgcatgacccattgtgt
actttgcaaaactgttcttcatctgagctgatccctgactcttcatctttctctgctgtt
gtggtgggacaagtggcacatgttattgaccttgatctggacagaagatctgtgacatca
tgggaagtagagagtgcaagagaagatggagagcttccgacagcattaccagctgcaaac
tcaccggatgattcgaaggtcactatggctaatgggtcttctgagcatgttgaacattct
agaagcctggctttgattacaaagagtgtgacaccttccaaaaaggtcaaatctcgagtg
ctgaggaaaagtgaggatgatttagaactcattctggatagtgacagtgaactggaggag
cacacatgcattgaccaagaaattgaaaatgtcagagttggcaaaccgtgggaagaccat
gctgcaaaagaattcactttgattctcactagaacttatgaaaatgagaggaatgcaaag
ttgaatgccaaggtaaaaatcagcacagaatatcctctcaggcctccacttttcacttta
agcttgctttctgatgggcctcaaggttttgaatggtacaatgagcttagagccatggaa
gcagaggttaatcttcacatcattaaggtcctgcctttggaacatgaaaactacatctta
gctcaccaaatacgttgcttggctatgctctttgattttcattttgatgcgcgccatgaa
aaaagaaagagcacttccataatagatgttggattatgcaagcctgttagtggaacaata
cttgcgagatctgtcaggggaagggatcggaggaagatgatttcttggaagggcatgggc
tgcaccccaggctatccttgctag

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