Elaeis guineensis (African oil palm): 105060909
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Entry
105060909 CDS
T03921
Name
(RefSeq) THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105060909
09122 Translation
03013 Nucleocytoplasmic transport
105060909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105060909
03041 Spliceosome [BR:
egu03041
]
105060909
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105060909
Spliceosome [BR:
egu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105060909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
105060909
NCBI-ProteinID:
XP_010943078
UniProt:
A0A6I9SGU7
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Position
13:779896..789289
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AA seq
787 aa
AA seq
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MQAMEVEAIPNSKRSPHDVLEETRTAMEEIAAKMLFIKKDGRPKSDLRELITQMSLLLLS
LRQVNRSILMEEDRVKVETESAKAPVDFTTLQLHNLMYEKNHYLKAIKACKDFRSKYPDI
DLVSEEEFFRSAPEDIKGKVLASDAAHDLMLKRLNFELYQRKELYKLHEKLEQHKKSLLD
TIANRKKFLSSLPSHLKSLKKATLPVQQQLGILHTKKLKQHHAAELLPPPLYIVYSQLLA
QKEAFGERIEMEILGSVKDAQIFAQQQANKDSGLSSNTENNRLEEDAPDEEEDVQRRRKR
PKRNQVKENIDQAGVCQIHPLKIILHIYDDEESEAKPSKLITLRFEYLVKLNVACVGVED
SEEGSDNNILCNLFPDDTGIELPHQAAKLYAGDSLAFGERRASRPYKWAQHLAGIDFLPE
VPPLHECNEALSSEALKGLDVAAGLSIYRHQNRVQTILQRIRSRKKAQMALVEQLDSLMK
LRWPLLAYGDIPWALHDPLCTLQNCSSSELIPDSSSFSAVVVGQVAHVIDLDLDRRSVTS
WEVESAREDGELPTALPAANSPDDSKVTMANGSSEHVEHSRSLALITKSVTPSKKVKSRV
LRKSEDDLELILDSDSELEEHTCIDQEIENVRVGKPWEDHAAKEFTLILTRTYENERNAK
LNAKVKISTEYPLRPPLFTLSLLSDGPQGFEWYNELRAMEAEVNLHIIKVLPLEHENYIL
AHQIRCLAMLFDFHFDARHEKRKSTSIIDVGLCKPVSGTILARSVRGRDRRKMISWKGMG
CTPGYPC
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgatggaggtggaggcgatccccaactccaagcgttctcctcacgacgttctc
gaggagacccgcacggcgatggaggagatcgccgcgaaaatgctcttcatcaagaaagat
ggccgccccaagtccgacctccgcgagctcatcacccagatgtccctcctcttgctctcc
ctccgccaggtaaatcgatcgatattgatggaagaggaccgggtgaaggtggagacggag
agcgcaaaggctccggttgacttcaccaccctccagctccacaaccttatgtacgagaag
aatcattacttgaaggccatcaaggcttgcaaagatttccgatccaagtatccggacatt
gacctcgtctccgaggaggagttcttccgttccgcgcccgaggacattaaagggaaggtc
ttggcgagcgatgccgcgcatgatttaatgttgaagaggctcaattttgagctctaccag
agaaaggagctgtacaaacttcatgagaaattggaacagcataaaaaaagtcttctggat
accatagcaaaccggaaaaagttcctctcaagtctcccatcacatctgaaatctctgaag
aaagcaaccttaccagtacagcagcaattagggattttgcataccaagaagctaaagcag
caccatgcagcagagttacttccacctcctctttatatagtctactcacagctactggct
cagaaagaagcatttggagagaggattgaaatggagatattaggaagtgtaaaggatgct
caaatttttgctcaacaacaagctaacaaagacagcggcttatcatcgaatactgaaaac
aataggttggaagaggatgcacctgatgaggaggaagatgtccagagaagaagaaagagg
ccaaagaggaaccaggtcaaggagaatattgatcaagcaggagtgtgccagattcatcca
ctcaagatcattcttcatatatatgatgatgaagagtctgaggctaaaccttcaaaatta
atcactctgagatttgagtacttggtaaagctaaacgttgcatgtgttggagtagaagat
tcagaggaaggatctgacaacaatatcttatgtaacttatttcctgatgatactggcatt
gagcttccccaccaggcagctaaactttatgctggggattcattagcatttggtgaaaga
agagcttcacgtccatacaaatgggcacaacatctagctggaattgattttttgccagag
gtgcctcctctgcatgagtgcaatgaagctttgagcagtgaagctttgaaaggtttagat
gttgcagctggacttagtatataccgtcatcagaaccgtgtgcagaccattttgcaaagg
attcgctccaggaaaaaggctcaaatggctcttgtggagcagcttgattccttgatgaag
ctcaggtggcccttactagcctatggagacattccatgggctttgcatgacccattgtgt
actttgcaaaactgttcttcatctgagctgatccctgactcttcatctttctctgctgtt
gtggtgggacaagtggcacatgttattgaccttgatctggacagaagatctgtgacatca
tgggaagtagagagtgcaagagaagatggagagcttccgacagcattaccagctgcaaac
tcaccggatgattcgaaggtcactatggctaatgggtcttctgagcatgttgaacattct
agaagcctggctttgattacaaagagtgtgacaccttccaaaaaggtcaaatctcgagtg
ctgaggaaaagtgaggatgatttagaactcattctggatagtgacagtgaactggaggag
cacacatgcattgaccaagaaattgaaaatgtcagagttggcaaaccgtgggaagaccat
gctgcaaaagaattcactttgattctcactagaacttatgaaaatgagaggaatgcaaag
ttgaatgccaaggtaaaaatcagcacagaatatcctctcaggcctccacttttcacttta
agcttgctttctgatgggcctcaaggttttgaatggtacaatgagcttagagccatggaa
gcagaggttaatcttcacatcattaaggtcctgcctttggaacatgaaaactacatctta
gctcaccaaatacgttgcttggctatgctctttgattttcattttgatgcgcgccatgaa
aaaagaaagagcacttccataatagatgttggattatgcaagcctgttagtggaacaata
cttgcgagatctgtcaggggaagggatcggaggaagatgatttcttggaagggcatgggc
tgcaccccaggctatccttgctag
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