Elaeis guineensis (African oil palm): 109505580
Help
Entry
109505580 CDS
T03921
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03030
DNA replication
egu03420
Nucleotide excision repair
egu03430
Mismatch repair
egu03440
Homologous recombination
egu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109505580
03420 Nucleotide excision repair
109505580
03430 Mismatch repair
109505580
03440 Homologous recombination
109505580
03460 Fanconi anemia pathway
109505580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egu03000
]
109505580
03032 DNA replication proteins [BR:
egu03032
]
109505580
03400 DNA repair and recombination proteins [BR:
egu03400
]
109505580
Transcription factors [BR:
egu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109505580
DNA replication proteins [BR:
egu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109505580
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109505580
MMR (mismatch excision repair)
109505580
DSBR (double strand breaks repair)
HR (homologous recombination)
109505580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
TMEM219
Motif
Other DBs
NCBI-GeneID:
109505580
NCBI-ProteinID:
XP_019704480
UniProt:
A0A6J0PFH3
LinkDB
All DBs
Position
3:complement(87498323..87501199)
Genome browser
AA seq
628 aa
AA seq
DB search
MAASLTANAIAVVNGGDLNLKPVVQVLDVRLISAAQERYRMVVSDGSATQQALLATQLGV
LVKAEKVKKGSVVQLLEYISSTVQGRRIIIVLNMQTLVIECEIIGNPNLPPEAAEITLQA
SSNNNFGNSKGASLSRAGIVSSSGTNPGNNVQSFHPTVQPSYKPPPNYKNRGAIMKNEAP
ARIIPIAALNPYQGRWAIKARVTAKGELRRYNNARGDGKVFSFDLLDSDGGEIRATCFNA
VVDRFYEIVDVGKVYMISKGTLKPARKSFNHLNNEWEIFLESTSTVELCPDEDNSIPTQQ
FNFRPISEIENAENNSIVDIIGIVTSINPSVTILRKNGMETLRRILNMKDVSGRSVELTL
WGDFCNREGRQLQEMLDSGIFPVLAVKAGKVNDFSGKSVGTISSTQLYIDPNSSEAHSLR
KWFDGGGKNAASQSISRDAMPELSPNDIRKKVSQIKHEGLGRGDKPDWVTVKATISFIKT
DTFCYTACPLMIGDRRCSKKVSRLASGNWCCDRCDKEFEECDYRYLLQAQVQDHTGLTWV
TAFQESGEEILGCSAKELYMLKYEENDDTRFGEIIRRSLFQQYLFKLKIKEEHFGDEQRV
KITVIKAEKVNPSTESRYLLDLILKHSA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagcctgacggcgaatgcgatcgcggtggtgaacggcggggatctgaacctg
aagccggtggtgcaggttttggatgtgaggctgatatcggctgcccaggagcggtaccgg
atggtggtgtcggacgggtcggcgacgcagcaggcgctgctggcgacgcagctcggtgta
cttgtcaaggcggagaaggtgaagaagggctcggtcgttcagttgctcgagtacatctct
agcaccgtccagggtcgaaggattattattgttctgaacatgcaaacgttagtcatagag
tgtgagataattgggaatcctaatctgcctccagaagctgcagaaatcactctgcaggca
tcatctaataacaattttggtaactcaaaaggagcatcactcagcagggcaggaattgta
tccagttcaggaacaaaccccggcaacaacgttcagagtttccacccaaccgtccaacca
tcttacaagcctccaccaaattacaagaaccgtggggcaatcatgaaaaatgaggctcct
gcacggataattccgatagctgctctgaatccttatcaggggcgatgggccatcaaagca
agagtgactgcaaagggagagcttcggaggtataacaatgccaggggagatgggaaagtg
ttctcctttgacctccttgattctgatggaggagagatacgtgcaacctgttttaatgct
gtagttgaccgtttctatgagattgtggatgttgggaaggtttatatgatatctaaggga
actctgaagcctgctcggaagagcttcaaccatcttaacaatgaatgggaaatatttttg
gagtcaacatcaactgtagagctctgtcctgatgaggacaactccataccaacacaacag
tttaatttcagaccaattagtgaaattgagaatgcagagaataactcaattgtggatatt
attggcatagtgacatcaattaatccttcagtcactatattgaggaaaaatggtatggaa
actctgagaaggatactaaatatgaaagatgtgtctggtcgaagtgttgagttaactcta
tggggagacttttgcaacagagaaggtaggcaactgcaagaaatgctcgactctgggatt
tttccagtattggctgttaaggcaggaaaagtaaatgacttcagtggaaagtctgttgga
acaatttcttctacacaactctatatagatcctaattcctctgaagctcatagcttgaga
aagtggtttgatggaggaggaaagaatgctgcctctcagtctatctccagggatgccatg
ccagagctttctccgaatgatatccggaagaaagtgtcacagatcaaacatgagggtctt
ggaaggggtgataaacctgactgggtgacagtgaaagctaccatttcgttcatcaagact
gatactttctgttatacagcttgtcctctgatgattggtgatagacgatgtagcaagaag
gtgtcgaggctggctagtggaaactggtgttgtgataggtgtgataaagaatttgaagag
tgtgactacaggtatcttcttcaggcccaggtgcaagaccatacaggactaacttgggta
acagccttccaagagtcaggggaggagattttaggttgctcagcaaaggagctatacatg
ctaaaatatgaagagaatgatgatactaggtttggggagatcatacgtcgtagtctcttt
cagcagtacctatttaagctcaaaataaaagaagaacactttggagatgagcagcgagtg
aaaatcacagtcattaaggcagagaaagtgaatccatccaccgagagcagatacctacta
gatttgatcttaaagcattctgcatga
DBGET
integrated database retrieval system
