Elaeis guineensis (African oil palm): 12079509
Help
Entry
12079509 CDS
T03921
Symbol
rpoA, ElguCp073
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
12079509 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
12079509 (rpoA)
03400 DNA repair and recombination proteins [BR:
egu03400
]
12079509 (rpoA)
Enzymes [BR:
egu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
12079509 (rpoA)
Transcription machinery [BR:
egu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
12079509 (rpoA)
DNA repair and recombination proteins [BR:
egu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
12079509 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
12079509
NCBI-ProteinID:
YP_006073136
UniProt:
H9LB48
LinkDB
All DBs
Position
Pltd:complement(78991..80016)
Genome browser
AA seq
341 aa
AA seq
DB search
MVREEVVGSTRTLRWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKVAHEYSTIVGIEESVHEILLNLKEIILRSNLYGVIDASICVRGPRYVTAQD
IISPPYVEIVDTTQHIANLTEPIDLCIELQIKRDRGYRMKSANNSQDGSYPIDAVSMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDINFE
ENKNRFPLPLFTFQNRLTNLKKNKKGIPLKCIFIDQSELPSRTYNCLKGSNIHTLSDLLS
NSQEDLMRIKFFRIEDVKQILDTLQKYFAIDLSKNKNKFSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagaggaagtagtaggatccactcgaacactacggtggaaatgtgttgaatca
agagtagacagtaagcgtctttattatggtcgtttcattctgtccccgcttatgaaaggt
caagccgataccataggtattgccatgcgaagggctttacttggagaaatagaaggaaca
tgtatcacacgtgcaaaatctgagaaagtagcacatgaatattctacgatagtaggtatt
gaagaatcagtacatgaaattttactaaatttgaaagaaattatattgagaagtaatctg
tatggagttatagacgcatccatctgcgtcagggggcctagatacgtaaccgctcaagat
atcatctcaccaccttacgtggaaatagttgacacgacacaacatatagctaacctgacg
gaaccaattgatttgtgtattgaattacaaatcaagagagatcgcggatatcgtatgaaa
tccgcaaataactctcaagatggaagttatcctatagatgctgtatccatgcctgttcga
aatgcgaatcatagtattcattcttatgggaatgggaatgaaaaacaagagatacttttt
ctagaaatatggacgaatggaagtttaactcctaaggaagcactttatgaagcttctcgt
aatttgattgatttatttattccttttctacatgcggaggaagaggacattaatttcgaa
gaaaataaaaacaggtttcctctacccctttttacctttcaaaatagattaactaatcta
aagaaaaacaaaaaaggaattccattgaaatgtatttttattgaccaatcagaattgcct
tccaggacctataactgtctcaaagggtccaatatacatacattatcggaccttttgagt
aacagtcaagaagatcttatgagaattaaattttttcgaatagaagatgtaaaacagata
ttggacactctacagaagtatttcgcaattgatttatctaagaataagaataagttttca
ttttaa
DBGET
integrated database retrieval system