Elaeis guineensis (African oil palm): 140851747
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Entry
140851747 CDS
T03921
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03030
DNA replication
egu03410
Base excision repair
egu03420
Nucleotide excision repair
egu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140851747
03410 Base excision repair
140851747
03420 Nucleotide excision repair
140851747
03430 Mismatch repair
140851747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egu03032
]
140851747
03036 Chromosome and associated proteins [BR:
egu03036
]
140851747
03400 DNA repair and recombination proteins [BR:
egu03400
]
140851747
DNA replication proteins [BR:
egu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140851747
DNA Replication Termination Factors
ELG1-RFC complex
140851747
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140851747
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140851747
Check point factors
HRAD17(Rad24)-RFC complex
140851747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_16
AAA_11
AAA_5
AAA_assoc_2
AAA_14
AAA_24
SLFN-g3_helicase
nSTAND3
AAA_2
ResIII
PhoH
AAA_19
AAA_7
AAA_28
AAA_30
DNAX_ATPase_lid
AAA_25
NPHP3_N
DUF815
RNA_helicase
AAA_18
Parvo_NS1
T2SSE
bpMoxR
TIP49
Tailspike_C
IstB_IS21
TIP49_C
Cdc6_lid
NB-ARC
ATPase_2
Motif
Other DBs
NCBI-GeneID:
140851747
NCBI-ProteinID:
XP_073099953
LinkDB
All DBs
Position
9:7710415..7716400
Genome browser
AA seq
341 aa
AA seq
DB search
MAPIVPSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLYGPEMYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGSRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
NRILHICKEEGLTLDSEALSTLSSISQGDLRRAITYLQSAARLFGSTISSGDLISVSGVI
PQDVVQSLFMACKSGDFDVADKEVSNIIAEGYPVSQMLCQLLELIVNADDISDEQKARIC
KKLGEADKCLIDGADEYLQLMDVASHTMRALCNMPEELRFD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctatagtaccaagctctcagccatgggtggagaaataccggccgaagcaagtg
aaggacgtggctcaccaggacgaggtcgtgcgtgtcctcaccaacaccctcgagaccgcc
aactgccctcatatgctcttctacggccctccgggaacggggaagaccaccaccgctctc
gcaatcgcccaccaactctacggaccagaaatgtacaaatcaagggttctagaactcaat
gcaagtgatgatcgtggaattaatgttgtgcggacaaaaatcaaagattttgctgctgtt
gctgtgggttctggatctcgacaaggtggttatccatgcccaccttacaagatcattatt
ctagatgaggctgattcaatgactgaagatgcacaaaatgctttgaggcgtactatggaa
acttactccaaagttacaagattcttctttatatgtaactatatcagcaggattatagag
ccacttgcttccagatgtgcaaagtttaggttcaagcctctttctgaagagatcatgagt
aatcgtattttgcacatttgcaaagaggaaggccttactctggattctgaggctctttct
actctgagctccatctctcaaggtgatcttcgccgtgcaattacatatttgcagagtgca
gctcgcttatttggatcaactatttcttctggagacctaattagtgtttctggggtaatc
cctcaggatgttgttcagtcactgtttatggcttgcaaatctggtgattttgatgtggca
gacaaagaagttagtaatataattgcagagggatatccagtttcacagatgctttgtcag
ttgttagagttgattgttaatgcagatgatatatcagatgaacaaaaggcaagaatttgc
aagaaactgggtgaagcagataagtgcctgattgatggggcagatgagtacttgcaacta
atggatgtggcctctcacactatgcgagctctttgcaacatgccagaggaattgcgtttt
gattaa
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