Enterococcus gilvus: EGCR1_03670
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Entry
EGCR1_03670 CDS
T05664
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
egv
Enterococcus gilvus
Pathway
egv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGCR1_03670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egv03021
]
EGCR1_03670
03019 Messenger RNA biogenesis [BR:
egv03019
]
EGCR1_03670
Transcription machinery [BR:
egv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EGCR1_03670
Messenger RNA biogenesis [BR:
egv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EGCR1_03670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
Spore_III_AA
ATPase_2
AAA_25
S1CSD-TOTE-2
AAA
NACHT
Motif
Other DBs
NCBI-ProteinID:
AXG37848
LinkDB
All DBs
Position
763652..764947
Genome browser
AA seq
431 aa
AA seq
DB search
MSDYLTMAELDNKTLKEIYAYAKDFKIPYYSQMNKKELSLAVIRAQAEKQGFFYMEGVLD
IIGQDGYGFLRPINYGSSAEDIYISSSQIRRFGLRNGDKVAGKARPPKESERYYGLMHVE
SVNGKDPEEAKERPHFPALTALYPEKQLVLETTPGRLSTRMIDIFSPVGFGQRGLIVAPP
KAGKTTILKEIANGITDNHPDVELIVLLIDERPEEVTDLERSVKGDVVYSTFDQQPQNHT
RVSELVLERAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAALYKPKKF
FGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNLELQLSRELSERRIFPAIDI
KKSGTRKEELLMSPDRLEEIFKLRNNMTGDSLEYTSQFVNFMKKTKTNEDVFKAFKDVSF
GGKTTRRNQKR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattatttaacaatggcggaactggacaataagacgctaaaagaaatttatgct
tatgcaaaagactttaaaattccttattatagtcagatgaataaaaaggaattgtcttta
gcggttatccgggcacaggcagaaaaacaaggcttcttttacatggagggagtcttagat
atcatcggtcaagacggctatggcttcttgcgcccaatcaactatggatctagtgcggag
gatatctatatttcttcttcacaaatccgtcgtttcggcttgagaaatggtgataaagtg
gctggcaaagcccgtccgccgaaagaatccgaacgttattatgggttgatgcatgtagaa
agcgtgaatggcaaagatccagaagaagccaaagaacgcccgcattttcctgcgttgaca
gcactttatcctgagaaacaattggttttagaaacgactcctggtcgactttctacccga
atgatcgatatcttctctcctgttggatttggtcaacgtggattgatcgtagcgcctcca
aaagcggggaaaacaacgattctcaaagaaatagcgaatggtattacagataatcatcct
gacgtggaattgatcgtcttactaattgatgaacgcccagaagaagtaaccgacttggaa
cgcagcgtaaaaggagatgtggtttattcgacctttgatcagcagccgcaaaatcatacg
cgtgtgtctgaattggtattagaacgggcaatgcgcttagtagaagacaagcgagatgta
gtgatcctgatggacagtatcacgcgtttagcacgtgcgtataacttagtcgttccaccg
agtggtcggaccttaagcggagggattgatccggctgcactgtacaagccgaagaagttc
tttggtgcagcgcgtaatattgaagaaggcggtagtctcacaatcttagcgacagcattg
gtagataccggcagtcgtatggacgatgtcatttacgaagaatttaaaggaacagggaac
ttagagttgcaattatcacgtgagttgtccgagcgccgtatcttcccagccatcgacatc
aagaaatctggtactcgtaaagaagaattattgatgagtccggatcgtttagaagagatc
ttcaagctgcgtaacaatatgaccggagattcattggaatatacgtctcaattcgtgaat
tttatgaagaagacaaagacgaacgaggatgttttcaaagcattcaaagatgtttccttt
ggtgggaaaacaacgcgtagaaatcaaaaaagataa
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