Enterococcus gilvus: EGCR1_03855
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Entry
EGCR1_03855 CDS
T05664
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
egv
Enterococcus gilvus
Pathway
egv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGCR1_03855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egv03019
]
EGCR1_03855
03400 DNA repair and recombination proteins [BR:
egv03400
]
EGCR1_03855
Enzymes [BR:
egv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGCR1_03855
Messenger RNA biogenesis [BR:
egv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EGCR1_03855
DNA repair and recombination proteins [BR:
egv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EGCR1_03855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DEAD_2
Cas3-like_C_2
MIT
Motif
Other DBs
NCBI-ProteinID:
AXG37882
LinkDB
All DBs
Position
802701..804095
Genome browser
AA seq
464 aa
AA seq
DB search
MELKKVLKEKFNYDQFRPGQQEIIETILEGHSVLGMLPTGTGKSLCYQLPGYLLEGTVVV
ISPLISLMEDQVIQLQGLGEKRAVALNSLLSSWEKQWILNEAHHYKFIFMSPEMFLSPNV
QNVLKRIKLAMIVVDEAHCISQWGIDFRPEYLKLADGIQFVGSPLILALTATATNEVRKD
IQRLLFEKEKAREVVFSVDRPNISFFVYQENKVEKLRELMISLEGSGIIYCATRKKVEEL
YHSFKDRQKIAYYHGGLSGQERRMLQQQFLSGELRILVATNAFGMGINKENIRFVIHYDL
PDSPENYLQEVGRAGRDGQLSQAILLYEEGDEFIHHFLQEQTNQSKKLFEIKQKMSDLVF
EDPLIKKWEQFFPNDSSHLMDLLSQRGVTKKKQLQKMLDYIATTKCRREFLVSYFDESLP
EKNPICCDNDGAVLQKYSVQETASMGQISWQKIIQKIFKNTEKD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaaaaagtattaaaggaaaaatttaactatgaccagtttcgacctggtcaa
caagaaataattgaaactatcttagaaggccattctgttcttggaatgcttcccactgga
actggaaagtcattgtgctatcaattaccaggttatttattagaaggaacagtcgttgtc
atttccccgctaatttctttgatggaggatcaagtaatacaactgcaaggactaggagaa
aagcgtgctgtggcactaaacagtctactttcatcgtgggaaaaacaatggatacttaat
gaagcacatcattacaagtttatttttatgagtccggaaatgtttttaagtccgaatgta
caaaatgtattaaagaggatcaagttggcaatgatcgtagtggatgaggcacactgcatt
tctcagtggggaattgattttaggcctgagtatttaaaattggcagacgggattcagttc
gttggaagtccattaattctagcattgacagcaaccgctacaaacgaggtaagaaaagat
attcaacgtttattgttcgaaaaagaaaaggcgagagaagttgttttttctgtggatcgt
cctaatatcagcttttttgtttatcaagaaaataaagttgaaaaactgagagaacttatg
atttctttagagggatcaggaatcatttattgtgcgactcgaaaaaaagtagaagaactc
tatcattcttttaaagatcggcaaaaaattgcttattatcatggtggtctcagtggtcaa
gaacgaagaatgcttcaacaacaatttttatccggggagttaagaatattagttgccacg
aatgcttttggtatgggaataaataaagagaatattcgatttgtcattcattatgatttg
ccagattcaccagagaattatttgcaagaagtgggccgagctggcagagacggacagttg
agccaagcaattttattgtatgaagaaggagatgaatttattcatcactttctacaagag
caaacaaatcaatcaaaaaaattgtttgaaattaaacaaaaaatgagtgatctggtgttt
gaagacccgctcattaaaaagtgggaacagttttttcctaatgatagttctcatttaatg
gatttattaagccaacgtggagttacaaaaaagaagcaactgcaaaaaatgcttgattat
attgcaactacaaaatgccggcgggaatttttagtttcttattttgacgaaagcttacca
gaaaaaaatccaatatgttgcgacaacgatggcgctgtattgcaaaaatacagcgtacaa
gaaacagcaagtatgggccaaatatcttggcaaaaaattattcaaaaaatttttaaaaat
acagagaaagattga
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