Enterococcus gilvus: EGCR1_06405
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Entry
EGCR1_06405 CDS
T05664
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
egv
Enterococcus gilvus
Brite
KEGG Orthology (KO) [BR:
egv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egv03016
]
EGCR1_06405
Enzymes [BR:
egv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EGCR1_06405
Transfer RNA biogenesis [BR:
egv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EGCR1_06405
Prokaryotic type
tRNA splicing ligases
EGCR1_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Derepression
Motif
Other DBs
NCBI-ProteinID:
AXG38367
LinkDB
All DBs
Position
1335362..1336528
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AA seq
388 aa
AA seq
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MKIIKGKYTSATVYAETLTESTRGQLMTLCNQPFTQGQKIRVMPDTHSGASCVIGMTMTV
TDKVAPSLVGVDIGCGVHVTKIKKGIKQNFDKLDRVIRNRIPSGHHSHSKPKYAFNLEHV
HAPVHRGAALRSIGTLGGGNHFIEVNEGKDGIYLVIHSGSRILGKEIADYHQEIAYQKLT
DARQEIHAQLKAAGTSLEKHSLANVLNELEIPYEFSFVAENDLANYLADMKIAQQYAAFN
RQTMALTILKAMKWEKQIIESFDSPHNYIDTDQMILRKGAASARKSEKMIVPLNMKDGSL
LGVGKGNPEWNQSGPHGAGRMMSRTQARDSINLENYQHMMRHVWTTSVSKKTLDEAPKAY
KSKKQLLTHLDETMEIHEVIRPLYNFKG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaataataaaaggaaaatacacctctgctactgtatacgcagagacactgacagaa
agtacaagagggcaacttatgactctttgtaatcaaccctttacacaaggccaaaagatt
cgagtgatgccggacacccacagcggcgcgagctgtgtcattggaatgacgatgacggta
acggataaagtagctcctagcttggtgggggtcgacattggctgcggcgtccacgtgacg
aaaatcaaaaaagggatcaaacaaaattttgataaactcgatcgggtcattcgaaatcgg
attcccagcggccatcactcccacagcaaacccaaatatgctttcaatttggagcacgtg
catgcccctgtccatcggggtgctgcattgcgaagtatcggaacattaggcggcggcaat
cattttatcgaggtcaacgaaggcaaggacgggatatatctggtcattcatagtggcagt
cgaattttgggaaaagaaattgcagattatcatcaagagatcgcctatcaaaagctcact
gacgcacgccaagagatacacgcacaactaaaagctgccggcactagtttagagaagcac
tccctcgccaatgtactgaatgaattggagattccttacgaattttctttcgttgctgaa
aatgatcttgcgaactatttagcagatatgaagatcgctcaacaatacgctgccttcaat
cgacaaaccatggcgctgacgattttaaaagcaatgaaatgggaaaaacagatcattgag
agctttgacagtccccataactacattgacactgatcagatgatcttgcgcaagggagcc
gcttcggctagaaagagtgaaaaaatgatcgttccattaaacatgaaagacggctccctc
cttggggtcggcaaaggcaatccagaatggaatcagtctggtcctcatggtgctggtcgc
atgatgagccggacacaagctagagattcgatcaatctggagaattaccagcacatgatg
cggcatgtttggacgacttctgtgtcaaaaaagaccttagatgaggcacccaaagcctat
aaatctaaaaaacaactcctcacgcatttagatgaaacaatggaaatacatgaagtgatt
cgtccattgtataacttcaaaggataa
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