Enterococcus gilvus: EGCR1_10975
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Entry
EGCR1_10975 CDS
T05664
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
egv
Enterococcus gilvus
Pathway
egv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EGCR1_10975 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egv03400
]
EGCR1_10975 (mfd)
Enzymes [BR:
egv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGCR1_10975 (mfd)
DNA repair and recombination proteins [BR:
egv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
EGCR1_10975 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
CarD_TRCF_RID
Helicase_C
ResIII
MFD_D3
Cas3-like_C_2
AAA_22
UB2H
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
AXG39180
LinkDB
All DBs
Position
complement(2239642..2243154)
Genome browser
AA seq
1170 aa
AA seq
DB search
MNLIEFINQLPLIKEWQANLNKKAKRQLLIGLSGSAKALVMAATYQTSQKQTIIAVPNLY
YSNQLADELRQIVDDVHLFPVDEVLSAEMAFASPEARAERVATLQALSQGEKGLYVVPIA
ALRKYLPSTEIWKANQLHWKIGSEVDLDHLAQRLVLMGYERQTMVGKPGEFSMRGSIVDI
YPLTTEYPVRVELFDVEIDSLRYFEPETQRSVENLDEAWITPTTDLVFSAEDLTQGAQKV
TQLLQNRLAVTKEKEAYNFLNDYFGQLIASWEDGIPTEQAKYYTDLLYEEKVSLLDHFAE
DALLFVDDYPRIMETNREMEREEAEWHTQKIEELRVFSDQTFGMNAHDLIKKAKLVTSFF
SLFQKGMGNLRFEAIHNFQYRSMQQFFGQMPLLKTEVDRWQKQGQTVLFLVSDQERQEKL
TQEFRDVAIQAVQTTPDKIVVGQTQIVIGNLTNGFELPQDKLVVVTEREIFQKVTKKRAR
RQTISNAERLKSYNELKTGDYVVHANHGIGKYIGMETIEIDGVHQDYMSILYQKDDKLFI
PVTQLNLIQKYVSSEAKPPKINKLGGSEWTKTKSKVSKRIEDIADDLIELYAKREAERGY
AFGPDDEYQKEFEDAFPYSETDDQLRSASEIKHDMEKARPMDRLLVGDVGFGKTEVALRA
AFKAMKENKQVAFLVPTTILAQQHYDTMTERFENFPINVGMLSRFRTKKQQNETIEQLRT
GQIDIVVGTHRLLSQDLKFADLGLLVIDEEQRFGVKHKERLKQLRSQVDVLTLTATPIPR
TLHMSMLGVRDLSVIETPPENRYPIQTYVMETNPGAIREAIEREMARGGQAFYLYNRVET
IERKVEELQMLVPDAKIGFAHGQMTEVQLENTLMDFIDGQYDILVTTTIIETGVDIPNVN
TLFVENADYMGLSTLYQLRGRVGRSSRIAYAYFMYEPQKILNEVSEKRLQAIKDFTELGS
GFKIAMRDLSIRGAGNLLGAQQHGFIDAVGFDMYSQMLSEAVDRKQGKNTQVERTSVEIN
LGIDAYIPGTYIEDERQKIEIYKRIRELESTEMLDEVEADLIDRFGDYPDEVANLLNVGQ
IKMDGDRALVESIQKRQQQIIFTLSKVGTKAYKVEQLFEALSVTKMKATLGVEKDQMVIK
LTIAKTMDEAIWLREISKFIRALREQKYKE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaattgaatttataaatcagctgccgttaataaaagagtggcaagcgaattta
aacaaaaaagcaaagcgacaattgctgatcggtctttctgggtctgccaaagctttggtg
atggcagcgacgtatcagacaagtcaaaagcagacaatcatcgcagtgcccaatctttac
tatagtaatcaattagcagatgaactgcgtcagatcgtcgacgatgttcatttgtttcct
gtggatgaagtactttcggcagaaatggcttttgcctcccctgaagcaagagcagaacgc
gttgctacgctacaggcgctttctcaaggtgaaaaaggactgtacgttgttccgatcgct
gcattgagaaagtatttaccgtcaactgaaatatggaaagccaatcaactacattggaaa
atcggcagcgaagttgatctagatcacttagcacaacggttggtattgatgggctatgag
cggcaaacaatggtcgggaaacccggtgagttcagtatgcgcggcagtatcgttgacatt
tatcctttgacgaccgaatatcctgttcgtgtagagttgttcgatgtggaaatagattct
ttacgctattttgagccagagacgcaacgctctgtggagaatttagatgaagcatggatc
accccaactactgatttggttttctctgcggaagatttgacacaaggcgcgcagaaggtg
actcaacttttacaaaatcgtttagcggtcacgaaggaaaaagaagcgtataatttctta
aatgattactttggtcagctcattgcgtcgtgggaagatggaatccctacggagcaggcc
aagtattatacggatttactatatgaagaaaaagtatctctactcgatcactttgctgaa
gatgcgctgttatttgtcgatgactatcctcgaataatggaaacgaaccgtgaaatggaa
cgagaagaagcggagtggcacactcaaaaaatcgaagagctgagagtgttttctgatcaa
acatttggaatgaatgcccacgacttaataaagaaggctaaacttgtaacaagcttcttc
tccttatttcaaaaaggaatgggaaatttgcgcttcgaagcaatccataattttcagtac
cgctcgatgcagcagttttttgggcaaatgccattactgaaaacagaagtcgatcgttgg
caaaaacaaggacaaacagtactatttcttgtttctgaccaggagcgtcaagaaaaactc
acacaagaatttcgagatgtggctatccaagcagtgcaaacaactccagataaaatagta
gtgggacaaacgcaaattgtaataggaaatttaacgaatggattcgagctgccgcaagat
aagttagtagtggtaacagaacgggaaattttccaaaaggtaaccaaaaaacgtgcgcgc
cgccaaacgatctccaacgcggaacgcctgaagagctataatgaattaaagacaggcgac
tatgtcgttcatgcaaatcacggaatcgggaaatatatagggatggagactatcgaaata
gatggggtccatcaagactatatgtcgattctgtaccaaaaagacgacaaactgttcatt
ccagttacacaattgaacctaatccaaaagtacgtttcttctgaagcaaaaccgccgaaa
atcaataaattaggcggcagcgagtggactaagacaaagagtaaagtatcgaaaagaatt
gaagatatcgcagatgacttgattgaactatatgcgaagcgtgaagcagagcgcgggtat
gcttttggtccagatgacgaataccagaaggaatttgaagatgcctttccttatagtgaa
acagacgatcagttacggagcgcttcggaaatcaagcacgacatggagaaggcgcgcccg
atggaccgtctgttggttggcgatgttggttttgggaagacagaggttgcgttgcgcgca
gcctttaaagcaatgaaagaaaataagcaagtagcattccttgttccgacgacgattttg
gcacagcaacattacgatacgatgaccgaacgttttgaaaatttccctataaacgtggga
atgttgagtcgttttcgtacaaagaagcaacaaaatgaaacgattgaacaacttcgtaca
ggacaaatcgatattgtagtcggtacgcatcgtctgttgtcacaagatttaaaatttgca
gatttgggcttattagtgatcgacgaagaacaacgttttggcgtgaaacacaaagagcgc
ttaaagcaactccgatctcaagtggatgtcttaacgttgaccgctactccgatccctcgg
acgctgcatatgtcgatgctgggcgtacgtgacctttcagtcatcgagacacctccggaa
aatcgctacccaattcaaacttatgtaatggagacgaatcccggagcgatccgtgaagct
atcgagcgagaaatggcacgtggcgggcaagccttttatctgtataaccgagtggagaca
atcgaacgaaaagtagaagaattacaaatgttggtaccagatgctaaaatcggatttgcg
cacggtcaaatgaccgaagtacagttagaaaatacattgatggactttatcgatggacag
tacgacatcttggtgacgacaacgattattgaaacgggggtagacattcccaatgtaaat
acgttgtttgtagaaaacgccgattatatggggctgtccacattgtatcaattacgtgga
cgtgtaggacgaagcagtcgaatcgcctatgcgtatttcatgtatgagccgcaaaaaata
ctgaatgaagtcagtgaaaaacgtctgcaggcaatcaaagactttactgaattaggctca
ggcttcaaaatcgcgatgcgggacttatctattcgtggtgcgggaaaccttcttggtgct
cagcagcatggctttattgacgcagtcggctttgatatgtactcacaaatgctttccgaa
gcagtagatcggaagcaaggcaaaaatacccaagtggagcgtacatcagttgaaatcaac
cttggaatcgacgcctatattccgggaacttatatagaagatgaacgacaaaaaatcgag
atctataaacggattcgcgaactagaaagcacggagatgctagatgaagtcgaagcagac
ttgattgatcgctttggtgattatcctgatgaggtagccaatttgctgaacgtcggtcaa
atcaaaatggatggcgatcgggcattagttgagagtatacaaaaacgtcagcagcagatt
atctttaccctaagcaaagttggaacaaaagcgtataaagtcgaacagctttttgaagca
ttaagtgtgacgaagatgaaagcaactctaggtgttgaaaaggatcaaatggtcatcaaa
ttaactattgctaaaaccatggatgaggctatttggttacgagaaatcagcaaatttatc
cgggcgttaagagaacaaaaatacaaagaatag
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integrated database retrieval system
