Enterococcus gilvus: EGCR1_12225
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Entry
EGCR1_12225 CDS
T05664
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
egv
Enterococcus gilvus
Pathway
egv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EGCR1_12225 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egv03021
]
EGCR1_12225 (rpoC)
03400 DNA repair and recombination proteins [BR:
egv03400
]
EGCR1_12225 (rpoC)
Enzymes [BR:
egv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EGCR1_12225 (rpoC)
Transcription machinery [BR:
egv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EGCR1_12225 (rpoC)
DNA repair and recombination proteins [BR:
egv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EGCR1_12225 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PRC
Motif
Other DBs
NCBI-ProteinID:
AXG39419
LinkDB
All DBs
Position
complement(2492210..2495863)
Genome browser
AA seq
1217 aa
AA seq
DB search
MIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIDAGNTSLEKKQLLTEREYREKRDQYGQEFHAAMGAEAIKQLLD
QVDLDGESAELKEELKTAQGQKRTRAIRRLDVLEAFRSSGNLPGWMVMDVIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSARSVIVVGPFLKMYQCGLPKE
MAIELFKPFVMKELVQREIASNIKNAKRKIERQEDVVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCEAYNADFDGDQMAVHLPLGEEAQAEARMLMLAATHIL
NPKDGKPVVTPSQDMVLGNYYLTMEEEGREGEGMIFRDMNEAVLAWRNGYVHLHSRVAVD
PNTLGDKPFTEEQKERMLITTVGKIIFNEIMPQEFPYLNEPTDFNLTQYTPDKYFVEKGA
DIPAAIKQQEIILPFKKKNLGNIIAEVFKRFKVTDTSMMLDRMKDLGYKHSTHAGMTVGI
ADIMALAEKQEIIDNAHKQVGTITKQFRRGLITDDERYERVIAVWNAAKDEIQQRLMESL
DAKNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGQIMELPIISNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLEISAIREGNEIIESLE
ERLVGRYTQKSVKHPETGEVLLPADALISEADARRLIDAGVEKLTIRSVFTCNTKHGVCK
HCYGRNLATGDDVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQEIF
EARNPKGLAVITEVTGEVVEIAEDAATRTKEVTVKGETDTRTYTVPYTSRMKVVEGDMIH
RGARLTEGSIDPKHLLQVRDVISVETYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKVR
VMDPGDTDILPGTLLDIADFKDQNYNTLVAGGKPATSRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMATYRNMEPKEVVVASENVYSIS
DIEAQMAAEDALNNPLN
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgtaaataaattcgaaagtatgcaaataggtttggcttctcctgaaaaaatc
agaagctggtcatacggtgaagtaaaaaaaccggaaaccattaactaccgtacactaaaa
cctgaacgcgaagggttattcgatgaaagaatttttgggccaaccaaagactgggaatgt
gcctgtgggaaatacaaacggattcgttataaaggaatcgtctgcgaccgttgtggtgtc
gaagttacacgttcgaaagttcgtcgtgaacgtatgggccatattgaattagcagcgcct
gtaacacacatctggtatttcaaaggaattccttctcggatgggtcttgtgttagacatg
agtccacgtgcgttagaagaaatcatctactttgcatcttatgtcgtgatcgatgcaggg
aatactagtttagaaaagaaacaattattgactgaacgtgaataccgtgaaaaacgggat
caatacggtcaagaattccatgcggctatgggtgccgaagccatcaaacaattgttagat
caagtcgatctagatggcgaatctgcagaattaaaagaagagttgaaaaccgctcaagga
caaaagcgtactcgcgctattcgtcgtttggatgtgttagaagccttccgttcttctggc
aacctgccaggctggatggttatggatgttatccctgtcatcccgccagatctacgtccg
atggttcaattagaaggtggtcgttttgcgacttctgacttgaatgacctataccgtcgt
gtcatcaaccgtaacaaccgtttgaaacgtttgttagacttgaatgcaccaaacatcatc
gttcaaaatgaaaaacggatgctgcaagaagccgtggatgcattgatcgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccgttgaaatctttgtctcacatgttg
aaagggaaacaaggtcgtttccgtcaaaacttgctgggtaaacgtgttgactactctgct
cgttccgttatcgttgttggaccgttcttgaaaatgtatcaatgtggtctgccaaaagaa
atggcgatcgaattgttcaaacctttcgtaatgaaagaattagtccaacgtgaaattgcc
tcaaatatcaaaaatgcgaaacgtaaaatcgaacgtcaagaagacgttgtttgggacgtt
ctagaagaagttattaaagaacaccctgttttactgaaccgggcacctacattgcacaga
ttaggtatccaagcgtttgaaccgatcttagttgaaggtcgtgccattcgtcttcaccca
cttgtgtgtgaagcctacaatgccgatttcgatggtgaccaaatggctgtccatctacct
ctaggtgaagaagcgcaagcagaagctcgtatgctgatgttagctgcaactcacatcttg
aaccctaaagacggaaaacccgttgttacaccatctcaagatatggtcttaggtaactat
tacctaacaatggaagaagaaggccgtgaaggggaaggaatgatcttccgtgacatgaat
gaagctgttttagcatggcgcaatggctatgttcacttgcattcacgcgtggctgttgac
cctaatacattaggcgacaaaccattcacagaagaacaaaaggaacgtatgctgatcact
accgttgggaaaatcattttcaacgagatcatgccgcaagagttcccttacttgaacgaa
ccgactgatttcaacttgacacaatatacacctgacaaatactttgtcgaaaaaggtgca
gatattcctgcagcgatcaaacaacaagaaatcatcttgccattcaagaagaaaaatctt
gggaatatcatcgctgaagtcttcaaacgtttcaaagtcactgatacatcaatgatgttg
gaccgtatgaaagacttagggtataaacattctacacatgctggtatgactgttggtatc
gcagatatcatggcgctagctgaaaaacaagaaatcatcgacaatgcccacaaacaagtc
ggcacgatcacgaaacaattccgtcgtggattgatcacggatgatgaacggtatgaacgt
gttattgccgtttggaatgcagccaaagatgaaatccaacaacgactaatggaatcctta
gatgcgaagaacccaatcttcatgatgtctgattctggagcccgtggtaacatctccaac
tttactcagcttgctggtatgcgtggattgatggccgctccgaatggacaaatcatggaa
ttgccgatcatctcaaacttccgtgaaggtctatctgtcttggaaatgtttatctcgact
cacggggcgcgtaaagggatgaccgatactgccttgaagacagccgattcaggttacttg
actcgtcgtttggttgacgttgcccaagacgttatcgtacgtgaagaagattgtggtact
gaccgtggtcttgaaatctctgcgattcgtgaaggaaacgagatcatcgaatccttggaa
gaacgtttagttggacgttatacacaaaaatctgtaaaacatcctgaaacaggcgaagtt
ctattgcctgcagatgcattgatcagtgaagcagatgcgagacgtctaattgacgctggc
gttgagaaattaacgattcgctccgtcttcacatgtaataccaaacatggtgtatgtaaa
cattgttacggccgcaacttggcgactggtgacgacgttgaagttggtgaagctgttggt
acgatcgccgcgcaatcaatcggtgaaccaggtactcagttgaccatgcggacattccat
accggcggggttgccggagatgatatcacacaaggtcttcctcgtgtccaagaaatcttc
gaagcacgtaatcctaaaggtttggctgtcattactgaagtgacgggtgaagttgttgag
atcgctgaagatgctgcgacacgtacgaaggaagttactgtcaaaggtgaaacggatact
cgtacctacactgttccttatacttctcgtatgaaggtcgttgaaggggacatgatccac
cgtggtgcacgattgacagaaggttcgatcgatccgaaacacttgctgcaagtccgcgat
gtgatctcagttgaaacatacttgcttcgtgaagtacaacgtgtttaccggatgcaaggg
gtagaaatcggcgataagcatattgaagtaatggttcgtcaaatgttgcgtaaagtccgc
gtaatggacccaggtgacacagatatcttgccaggtacattgctggatattgctgacttt
aaagatcaaaactacaataccttagttgctggcggcaaacctgcgacatctcgtccagtc
ttgcttggtattacgaaagcttcattggaaacaaacagcttcttatctgctgcatccttc
caagaaacaacacgtgtcttgacggatgctgcgattcgcggtaagaaagatccgttactt
ggattgaaggaaaatgttatcatcggtaagatcattcctgctggtacaggtatggcaact
taccgtaacatggaaccaaaagaagtcgttgtagctagcgaaaatgtttacagtatctct
gatattgaagcacaaatggctgcggaagacgctttgaacaatccattaaactaa
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integrated database retrieval system
