Enterococcus gilvus: EGCR1_13755
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Entry
EGCR1_13755 CDS
T05664
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
egv
Enterococcus gilvus
Pathway
egv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGCR1_13755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egv03019
]
EGCR1_13755
03009 Ribosome biogenesis [BR:
egv03009
]
EGCR1_13755
Enzymes [BR:
egv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EGCR1_13755
Messenger RNA biogenesis [BR:
egv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EGCR1_13755
Ribosome biogenesis [BR:
egv03009
]
Prokaryotic type
rRNA helicases
EGCR1_13755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
FlaC_arch
CMS1
Motif
Other DBs
NCBI-ProteinID:
AXG39700
LinkDB
All DBs
Position
2799299..2800870
Genome browser
AA seq
523 aa
AA seq
DB search
MGGYHLKFKELKLAPELLLAVERAGFEEATPIQEQTIPLALAGKDVIGQAQTGTGKTAAF
GLPMLDKIDTTKNGLQGLVISPTRELAIQTQEELYRLGRDKKIRVQAVYGGADIGRQIRG
LKDRPHIVVGTPGRMLDHINRHTLKLETVETLVLDEADEMLNMGFLEDIEKIISKVPAER
QTLLFSATMPDAIKKIGVKFMKDPEHVKIKAKEMTADLIDQYYVRAKDYEKFDVMTRLFD
VQTPDLAIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKRGDLDILVA
TDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYLHVIE
NLTKKRMNPMRPPTEKEAFKGQLGAAMEQVQSQMEENSDSLEKYNESAKELLAAYSPEEL
VALLLKTTAKDPSDAVPVKITPERPLPSNKKGGFNRGGGKRSGGNNRGGGRGKDNYRKDR
GGDRDRNKNKNYGGNKQRSNNNKNTNRSNDKKRGFVIRTNSND
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ataggaggatatcatttgaaattcaaagaattaaaattagcaccagaactattactagcg
gttgaacgcgcaggatttgaagaagcaacaccgatccaagaacaaactattcctttagca
ttagccggaaaagacgttattggtcaagcacaaacgggtacaggtaaaacagccgctttt
ggcttgccaatgctagataaaatcgatacaacgaaaaatgggttacaaggtctggttatc
tcaccaactcgtgagcttgccattcaaacgcaagaagaactgtatcgtctaggacgcgac
aaaaagattcgtgtacaagcagtttacggtggcgcagatattggccgtcaaattcgtggg
ttgaaagatcgtccacatatcgttgtaggaacaccaggacggatgcttgatcacatcaac
cgtcacacattgaaattagaaactgttgaaacattggtcttggatgaagcagacgaaatg
ttgaacatgggcttcttagaagatatcgaaaaaatcatcagtaaggtccctgcagaacgc
caaacattgttgttctcagcaacaatgcctgatgcaatcaaaaaaatcggcgtgaaattc
atgaaagaccctgaacacgtgaaaatcaaagccaaagaaatgacggctgatttgatcgat
caatattatgttcgggcaaaagattatgaaaaattcgatgtcatgacgcgcttgtttgat
gttcaaacaccagacctagcgatcgttttcggtcgtacaaaacgccgtgtagacgaattg
gctcgtggcttagaagcacgcggctataaagctgaaggtatccatggcgacttgtcacag
caaaaacggatgagcgtattacgttcgttcaaacgtggcgatcttgatattttagtagcg
acagacgtagcagctcgcggcttggatatttctggcgttacccacgtatacaactacgat
attccacaagatccagaaagctatgttcaccgtattggtcgtacaggccgtgctggtaaa
ggcggaatgtctgtcacattcgttacaccaaacgaaatgggctacttgcatgtgattgaa
aacttgacgaaaaaacgcatgaacccaatgcgtccgccaaccgaaaaagaagccttcaaa
ggccaattaggcgcagcgatggaacaagttcaaagtcagatggaagaaaattccgacagc
cttgaaaaatacaatgagtctgctaaagaattattagcggcgtattcaccagaagagctt
gttgctctattgttgaaaacgacagcaaaagatccttcagatgctgtaccagtaaaaatc
actccagaacgcccattgccttcaaataaaaaaggcggcttcaatcgtggcggaggaaaa
cgcagcggtggaaataaccgtggcggcggccgtggtaaagataattaccgtaaagaccgt
ggcggtgatcgcgaccgtaataaaaataaaaactacggtggcaacaaacaacgcagcaac
aacaacaaaaatacaaaccgcagcaatgataaaaaacgtggtttcgtgattcgtacgaac
tcgaacgactaa
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