Egretta garzetta (little egret): 104121901
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Entry
104121901 CDS
T05152
Symbol
TRPV1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104121901 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
egz04040
]
104121901 (TRPV1)
Ion channels [BR:
egz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104121901 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Ion_trans
Motif
Other DBs
NCBI-GeneID:
104121901
NCBI-ProteinID:
XP_009632248
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MSSILGKMKKFGSSDIEESEVTDEHTDGEDSVLGTPDSLQGTLSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFYQLDHLMAPSVIKFHANLERGKLHKLLSIDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLDDLLLYLNRTLKHLTDDEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQAADIAAEDSMGNTVLHTLVE
IADNTKDNTKFVTKMYNSILILGAKTNPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEIIAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHIVILTAAAYYRPVQNEKPPFTFHHSTGEYF
RVTGEILSVLGGLYFFFRGIQYFVQRRPSFKTLIVDSYSEVLFFVHSLLLLSSVVLYFCG
QELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFST
AVVTLIEDDNEGQDINSSEYARCCQMRRGRTSYNSLYYTCLELFKFTIGMGDLEFTENYR
FKSVFVILLXALMGETVSKIAQESKSIWKLQRAITTLDIENSYLNCVRRSFRSGKQVLVG
VTPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRQNPSYSIKPGRVSGKNWKT
LVPLLRDGSRREETQKLPEEVKLKPGMEPYYELEDSETLKEALPKSV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccattcttgggaagatgaagaaatttggcagttctgacatagaggaatctgaa
gtgacagatgaacacacggatggggaggactccgtgctgggaacgcctgacagcctccag
ggtacactcagcaccaaggtgcagccacccaaaagcaacatctttgcaagacgtgggcgg
tttgtgatgggggatagtgacaaggacatggctcccatggactccttttaccagttggat
cacctgatggcaccttctgtcatcaaatttcatgccaatttggagagggggaagcttcat
aagctcctatctatagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctggatgatctgcta
ctctatcttaatagaaccttgaagcatctcacagatgatgagttcaaagagccagaaact
gggaaaacctgcttactgaaagccatgctgaatctacatgacgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagag
tatactgacaattactacaagggccagactgcacttcacatcgccattgagagaaggaac
atgtacctggtgaagcttttggtccagaatggagcagatgttcatgcaagagcctgtggg
gagttcttcaggaaaatcaaagggaaacctggcttttattttggggagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctccttgagaacccctaccag
gcagctgacattgccgctgaggactccatgggcaatacggtcctgcacacactggtggaa
attgcagataatactaaggataataccaagtttgttaccaagatgtacaatagcatattg
atccttggtgccaaaactaatccaatcctgaagctagaagaactcaccaacaagaaaggg
ctgactccattaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagatcctgagtgcagacacttgtctaggaagttcactgaatgggct
tatggacctgtccactcatctctttatgacctgtcctgtatagacacatgcgagaaaaat
tcagtgcttgagattattgcctacagtagtgaaacgccaaaccgtcatgagatgctgctg
gtggaaccccttaacaggctgctgcaagacaagtgggaccggtttgtcaaacacttattt
tacttcaacttctttgtctataccatgcatattgtcatcctcactgcagctgcttactat
agacctgtacagaatgaaaagcctccattcacatttcatcacagcactggggaatatttt
cgagtgactggagagatcctgagtgtactgggaggtctctatttttttttcagagggata
cagtattttgtgcagaggcgcccatcattcaagacgctgatagttgacagctacagcgag
gttcttttctttgttcactccttgctcctcctgagctctgtggtgctgtacttctgtggc
caggaactgtacgtggcttccatggtcttctccttggcgctgggctgggctaacatgctg
tactacacccgtggcttccagcagatgggcatttactctgtcatgattgccaagatgatc
cttagagatttatgtcgcttcatgtttgtctacctagtattcctcttgggattttctaca
gctgtggtgactttaattgaagatgacaatgaggggcaagacataaatagctctgaatat
gccagatgctgccaaatgagacgaggccgcacatcctacaatagtctgtattatacctgc
ttggagcttttcaagttcactattgggatgggggacctggagttcacagagaactacagg
ttcaagtctgtgtttgtcatccttttgnnggcactgatgggggaaactgtgagcaaaatt
gcacaggagagcaagagcatctggaaacttcagagagccatcacaaccttggatattgaa
aacagctacttgaactgtgtgaggcgctcgttccggtctgggaagcaagtcttggtgggg
gtcacacctgacggccaagatgattacagatggtgctttagggttgatgaagtgaactgg
tccacgtggaatactaatctgggcataatcaatgaagaccctgggtactctggggacctc
agacaaaatcccagttactctattaagcctggcagagtttcagggaaaaactggaaaacg
ttggttccacttttaagagatggaagcaggagagaagagactcagaaactaccagaagaa
gtcaaattaaaacctggtatggaaccttattatgagctagaagattctgagacgttgaag
gaggcacttccaaagtcagtctaa
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