Egretta garzetta (little egret): 104122669 Help Entry 104122669         CDS       T05152                                  Symbol COL27A1 Name (RefSeq) collagen alpha-1(XXVII) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism egz  Egretta garzetta (little egret) Pathway egz04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:egz00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104122669 (COL27A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:egz00536]     104122669 (COL27A1) Glycosaminoglycan binding proteins [BR:egz00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104122669 (COL27A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 GH131_N Laminin_G_3 Motif Other DBs NCBI-GeneID:  104122669 NCBI-ProteinID:  XP_009633137 LinkDB All DBs Position Unknown AA seq 1747 aa AA seqDB search MEPESEPVSRLRATAAGRGGFCFLWTVLCFTWFLGFTQGNSEDVDVLQRLGLSGKRPSSG WSSSRSVPQGVIPFKSGVIFTQRARIEAPVSTILPTGSSTDLLLVLSLCSHRINNAFLFA VKNKKKKLQLGVQFVPGKIIVYVGHKRSVYFDYNVHDGQWHNMAIDIRGQTVTLFTSCGK RRVHADLHFKKDEALDPHGSFLFGKMNQHSVQFEGAICQFDIYPSAKAAHHYCKYLKKQC RQADTYRPNLPPLIPLLPRDPSASPSTPQHMEPSLQGLRNVTTAAPSLEFGRVTAPLKAR GSGATTIVLVSSPPPLPKLTTKAAKVMVAPSSVPSSMETQPPTRSVPRGTVTTFRVSRPT PSTRMEKNLLPIAKKAPPTSQSPATASRKESKQETKKKINQKPTIEPSEAPSTGKPRRRV TDNTTSSVHFVTLKQSPQNPGNGPLPKKHVPSPTRRVDPSDIPLVYPKPPLGSAGPVSRA RAQAFNLTTPAATDGYQIFDPLGPTPFPFLLGYPGVKGERGPQGPPGLPGLPGPPGKRGS RGPPGPHGNPGSPGPPGLKGQKGDPGLSPGKARNGQKGDVGLPGLTGFPGPPGRKGYKGY PGPPGHPGDQGERGPDGSPGAKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGADGE RGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGVLGLIGDMGSVGPIGY PGPKGLKGLMGNPGEHGLKGDKGDQGGAGVPGDIGFQGDKGSQGLPGVPGARGKAGPLGK VGDKGPVGFPGPPGPEGFPGDIGPPGENGPEGLKGKPGARGLPGPRGLPGQEGDEGPLGP PGVPGPEGRSGRKGFPGRPGPDGPKGEPGNHGRPGKVGEQGLMGFIGPVGEPGIVGEKGD RGSVGPPGPPGVKGSMGHPGTPGGVGFPGIPGPTGPAGVRGAPGIRGMKGRRGARGPDGP VGEPGSRGVKGRPGEPGKLGPDGLQGKMGETGETGARGFPGIQGPSGPPGAKGAPGDPGP QGPQGLPGPLGEIGHKGPPGSMGQPGLAGEPGMKGDPGQLGIPGEQGLVGQRGESGLEGD SGPPGPDGVKGDKGEQGLEGEKGEKGNEGLKGKEGPPGYPGITGVRGPEGKPGKQGEKGK PGQKGSKGYQGQLGETGSPGKEGPKGNQGPKGSRGTLGPMGAPGRMGAQGEPGLKGYQGH AGPPGPIGPPGPKGEKGEQGDDGKVEGPQGPPGDRGPVGDRGDRGEPGDPGYPGQEGLDG ERGKPGQQGLPGDPGPPGQPGAKGSKGDVGQKGKQGTRGNAGSRGSPGILGLPGPRGVVG RQGQEGAPGVDGVPGKDGVPGMLGEQGDDGEEGVTGMSGKRGNPGIPGLPGAQGPPGFKG ERGLPGQTGQTGKRGSSGGTGLPGSPGDPGPKGQPGDFGEAGFPGIVGMFGPKGPPGDLG FKGIQGPRGPPGLMGKEGIIGPLGIQGPTGSPGPKGDKGSRGEMGLQGPRGPPGPRGHPG PPGPPGIPASFQQDSFGAAFRTLIDSNTALKTEGYQHPDLLTLDHGGEIFKTLHYLSNLI QSIKRPLGTKENPARICRDLMNCEQKMNDGTYWIDPNLGCSSDTIQVICNFTNGGQTCLS PITVSKLDFDIGRVQMNFLRLLSSEVVQHITIHCLNTSIWREGSSEKPSEKAVRFRAWNG QMFEADGQLRPEVAADDCKIKDGRWHRTLFSFRTQDPQQLPIVNIYNLPPSEPGKQYHLE VGPVCFL NT seq 5244 nt NT seq  +upstreamnt  +downstreamnt atggagccggaatcagagccggtctccagactcagagctacagcagcaggcaggggggga ttctgctttctctggactgtattatgttttacctggttcctgggattcacacagggaaat tctgaagatgtggatgttcttcaaagactgggcctgtcagggaaaaggccatcgagcgga tggtcctcatcacgttcagttcctcaaggagtcattcctttcaaatcaggggtcatcttc actcagcgagcacgcatcgaagcaccggtcagcaccatcctccccacaggctccagcact gacctgctcctggtgctgagcctctgctcccaccgcatcaataatgcttttctctttgct gtcaagaacaaaaagaaaaaactgcagctgggggtccagtttgtgcctgggaagatcata gtgtatgtgggccacaagcgctctgtatattttgattacaatgtccatgatggccagtgg cacaatatggccatcgatatccgtggccagacagtcactttatttacttcttgtgggaag cgcagagtacatgcggatttgcattttaaaaaggacgaggcattggatccacatggatct ttcctctttgggaagatgaaccagcactccgtgcagtttgaaggagccatctgccagttt gatatttatccttccgccaaggcagctcatcattactgtaaatatctaaaaaaacagtgc aggcaagcagatacctaccggccgaacctgccccccctcatccccctcctgcccagggat cccagtgcctccccgagcaccccacagcacatggagccctcgctgcagggtttgagaaac gtgaccactgctgccccatccttggagtttggcagggtcactgcacccctcaaggctcgg ggttcaggtgcaacgaccattgtattggtatcatccccaccaccgctgccaaaactgaca accaaagccgcaaaggtcatggtggccccatcttctgttccatcgagtatggaaacacag ccacccacccgttcagttcctcgggggacggtgacaaccttcagggtgtctcggcccact cccagcacgcgcatggagaaaaatcttcttcccattgccaaaaaggccccaccaacaagc cagagccctgccacggccagcagaaaggagtccaagcaagagaccaaaaagaagatcaac caaaagcccaccattgagccctccgaagcacccagtactggaaagccaaggaggagggtg actgataacacaaccagcagcgtccactttgtcaccctaaagcaaagcccacagaacccg ggcaacgggccccttccaaagaagcatgtgccgtcccccaccaggagagtggatcctagc gacatccctctggtgtaccccaaaccacccctggggtctgccggtcctgtctccagagcc agggcacaggccttcaacctcacaaccccagctgcgactgatggctatcaaatctttgac cccctcggacccactccatttccatttttactgggatatccaggagtgaaaggagagaga ggacctcagggtccaccaggtctgccgggcttaccaggaccacctggcaagagaggttcc cgaggtcccccaggtccccacggaaaccctggctcacctggccccccaggcctgaaaggt cagaagggtgatcccgggctgtcacctggaaaagctcgcaatggacagaagggagacgtg ggcttgcctggtttgactgggttccccggaccacctggtagaaagggatataaaggctac cctggaccacccggccaccctggagaccagggcgaacgaggaccagatggaagtccaggt gccaaaggttatcctggcaggcagggtttacctggccccataggggaagctggtccaaaa ggcagtcggggatatattggtctcccaggattatttgggctaccaggagctgatggagaa cgagggatccctggagttcctgggaagaggggcaagatgggtaggccgggttttcctggt gattttggggaacgaggacctccaggcatcgatgggaacccaggagaattgggagcccca ggtcctcctggagtccttggactcattggtgacatgggctctgtcggaccgataggctat ccaggaccaaaaggcttaaaggggctgatgggaaaccctggagaacatggactgaaaggt gataagggtgatcagggaggagcaggtgttccaggagatatcggcttccaaggagacaag ggcagccagggtttgcctggggtcccgggggcacgagggaaagcaggccccctgggcaaa gtcggtgacaaaggtccagttgggtttccaggaccgcccggccctgagggcttcccaggt gacattggcccaccaggagaaaatggtcccgaaggcctgaagggaaagccaggagcacga ggtttacctgggccgagaggactgcctggacaagagggagatgaaggacccttaggacca ccaggagtccctggtccagagggtcgatctggccggaagggatttccggggagacctggt cctgatggtccaaagggtgagccaggaaaccatggccgaccagggaaagttggtgagcag ggtctaatgggtttcattggtccggtaggagagcctggaatagtgggagaaaagggcgac cgtggctcagtgggacccccaggccctccaggagtcaaggggtcgatggggcaccccggg acaccaggaggggtgggttttcctgggatccctggaccaacaggtccagcaggagtccgt ggtgcaccggggataagagggatgaaaggccgcaggggtgccagaggacctgatggacca gtaggcgagccagggtcacgaggtgtcaagggcagaccaggggagccaggcaagctgggg ccagatggactgcaggggaagatgggtgagactggggagacaggagcacgtggcttccca ggtatccaaggaccttctggacctccaggagcaaaaggggctccaggcgacccaggtcca caaggaccacaggggctacctgggcctttgggagaaattggacataagggaccgcctggc tcaatgggacaacctggccttgcaggtgaacctggcatgaagggtgaccctggccagttg ggaatccctggagagcaaggtctcgttggccaaagaggagaatcagggctggaaggggac agcgggccacccgggccggatggtgtcaagggagacaaaggagagcagggcctggaagga gagaaaggagaaaaaggcaacgaaggactgaaggggaaagaagggcctcctggatatccc ggcatcacaggtgtccgaggaccagaagggaaaccgggaaaacagggggaaaagggcaag cctggccagaagggcagcaagggctaccaggggcagcttggtgagacaggatctccaggg aaggaggggccgaaggggaaccaaggccctaaaggatcccgaggtaccctgggacctatg ggtgctccaggaaggatgggtgctcaaggggaacctggcttaaagggttaccagggacat gcaggaccaccagggccaattggaccaccagggccaaagggggaaaagggagaacaaggt gatgatgggaaggtagaaggcccacagggaccacctggagacagaggccccgttggcgat cgaggtgatcgaggggagcctggagaccctggttatcccggtcaagaaggacttgatgga gaaagaggaaaacctggacagcaaggcttgcctggggatcctggaccaccaggccagcca ggagcaaagggatccaaaggtgatgtgggtcaaaaaggaaagcaaggaacacggggcaat gcagggagcagaggctcaccgggcatccttggcctaccaggtcctcgaggagtggtggga aggcagggtcaagagggtgcccctggagtggacggagtgcctgggaaggatggcgtgcct gggatgctgggagagcagggtgatgacggggaagaaggtgtgacagggatgtcaggcaaa cgagggaaccctggcataccaggactccctggggcacagggaccaccaggattcaagggt gaaagaggattgcctggacagactggccaaacaggaaagcgaggatcatcaggaggaacg ggtcttccagggagccccggcgatccaggacccaaaggacagccgggagactttggcgag gcaggatttccagggatcgtgggcatgtttgggccaaagggccccccaggagaccttggt ttcaaaggcatccagggaccacgtgggccgcctggtctcatgggaaaagaaggaattatt ggtccacttggcattcagggtcccacaggaagcccagggcccaagggagacaaaggcagc cgtggagaaatgggtctgcaaggtccaaggggtcctccaggcccacgaggacaccctggc cctccgggaccgccaggaattccagcctcatttcaacaagacagctttggggcagcattc cggacactaatcgactcgaacaccgcgctcaagacagagggttaccaacatccagacctt ctcacgctggaccatggaggggagatctttaagactctacactacctcagcaacctcatt cagagcatcaaaagacccctgggaaccaaggaaaaccctgcccgcatctgtcgagacctc atgaactgtgaacagaagatgaacgatggtacctactggattgacccaaaccttggctgt tcctcagataccatacaggtcatctgcaacttcaccaatggcgggcagacatgtctcagt cccatcactgtctccaagctggattttgacatcggtagagtccagatgaatttcctgcgc ctcctgagctcagaggtggtgcagcacatcaccatccactgcctgaatacctccatctgg cgggaaggctcctccgagaaaccttccgaaaaagctgtgcgcttcagggcctggaacggg cagatgtttgaggcagacgggcagctcaggccagaagtggcagctgatgattgcaagatc aaggatggacgctggcatcggactctcttttcgtttcggacacaggaccctcagcagctg ccaattgtcaacatctacaaccttcccccatccgagccaggaaagcaatatcacctcgag gtcggccccgtgtgcttcctttga

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