Egretta garzetta (little egret): 104122972
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Entry
104122972 CDS
T05152
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104122972 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104122972 (CNOT10)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104122972 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ARM_TT21
TPR_17
TPR_7
DUF6058
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
104122972
NCBI-ProteinID:
XP_035746596
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MWRRGMRRLMTAVTLQVPLDQGTEKHEGAGTSGITDQEKELSSSALQAFLAGNYDACLQH
LNTLQDINKDDYKITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVEN
SMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKAL
HLLAVLEKMISQGNNNSKNGKNESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQ
MKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTG
ECLRCMFWNNLGCIHFAMGKHNLGIFYFKKALQENDNACAQLGMVSSDPGKKFSGRPMCT
LLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSE
QETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNA
LLLLPEDQQEPKQENGSKTSSQLGGNTENSESSEACSNKSHEGDKFIAAPPSSPLKKQEL
ENLRCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRIS
DAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFN
LGSAYCLRSEYDKARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQL
LPSVKTLSDMRKKPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaagaggtatgagaaggttgatgactgcagtcactctccaggtgcctttggat
caaggtaccgagaaacatgaaggagcaggcacttctgggattaccgatcaggaaaaggaa
ttgtcaagcagtgcgttacaagcttttctggctggaaactatgatgcttgtttacaacac
ctaaatacccttcaagacataaacaaagatgactacaaaataactttgaatactgctgtt
gcagagttctgtaaaagtaaccagaccacaacagacaatttgagacaaacccttaaccag
ctgaagaaccaggttcactctgctgttgaagaaatggatggtttagatgatgttgaaaat
agtatgctgtactacaatcaagctgttattttgtatcatctgcgtcagtatactgaagct
atatcagttggggagaagctgtaccagttcatagagcctttcgaagagaagtttgcccag
gctgtgtgcttcttgcttgtagacttatacctgctgacttaccaagctgagaaagccttg
catctgcttgctgttctggaaaaaatgatttcacagggcaacaataacagcaagaatgga
aaaaatgagtcaggtaataatacaaataaagattcctcaaatcaaaaagctgaaagtgga
gctttaatagaagttgctaaatctaagatacatcagtataaggtgagagcctatatccag
atgaagtcactaaaagcatgcaaaagggagatcaagtctgttatgaatacagctgggaat
tcagctccttctctctttcttaaaagcaattttgagtatttgaggggcaattatcgtaaa
gcggtgaaacttctaaacagtgcaaacattgctgaacatccaggcttcatgaaaacaggt
gaatgcttaagatgtatgttctggaacaatcttggctgcatccactttgcaatgggcaag
cacaatttaggaattttttacttcaaaaaagccttgcaagaaaacgataatgcatgtgca
cagctaggaatggttagctcagatccaggtaaaaaattttcagggagacccatgtgtacg
ctactgactaacaaaaggtatgagttactctacaattgtggaattcagctcttgcatatt
gggaggcccttagctgcctttgaatgcctgattgaggcagtccaggtttatcactcaaac
cctcgtctttggctgagaatagcagaatgctgcattgctgctaataaagggacatcagaa
caagagactaaaggtcttcccagcaaaaagggtattgtgcaatctatagtaggtcaaggc
taccaccgtaagatagtcctagcatctcagtcaatacagaatgttgtttacaatgatggg
cagtcctcagcaatacctgtagccagtatggaatttgcagcgatttgtctaagaaatgcc
ttgctgctactgccagaagatcagcaggagccaaagcaggaaaatggatctaaaactagt
agccagcttgggggaaatacagaaaacagtgaaagcagtgaagcatgcagcaataaaagt
catgaaggggataaattcattgcagctccaccttcttcgcctttgaagaaacaggaatta
gaaaatttaaggtgctcaatacttgcgtgtagtgcttacgtggctctggctttgggtgat
aaccttatggcattgaatcacgcagataaacttcttcagcaaccaaagctgtcagggtct
cttaagtttcttgggcatttgtatgcagcagaagctctcatctctctagacagaatatct
gatgctatcactcacttgaaccccgagaacgtcactgatgtttcccttgggatctcttca
aatgagcaggatcaagggtctgacaaaggagagaacgaggcaatggaatcttctggcaag
cagaccccacagtgttatcctagttcggtcacatctgcacgaacaatgatgttgtttaac
cttggaagtgcttactgcttgaggagtgaatatgataaagctcggaagtgtcttcatcag
gctgcttcgttgatccaccccaaagagatccctccagaggctattctgctggctgtatat
cttgaattacagaatggtaacacgcagttggcgctgcagatcatcaagagaaaccagctt
ctcccttctgtgaaaacgctctccgacatgcggaagaagcctgtttttcagccagtccac
tcaatccagcccattcagatgccagctttcaccaccgttcaaaggaagtga
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