Egretta garzetta (little egret): 104123049
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Entry
104123049 CDS
T05152
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egz03036
]
104123049 (SHOC1)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104123049 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
104123049
NCBI-ProteinID:
XP_035746714
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MFAALKYLSTDYLYESTARQKISIWRLSLCFPPCLHQDEKYHLTGLFADDKYRKPWTRIT
STQNMIDVSVLDQWRKSLSVADFLEKKPISSVAFNISNESTEVIPSSNPCSQTDIEGPFL
LMNNVFKGEYTQEKYLKTDYATEFKEQWQDLCMKEELVFIDNLENFRKNLPSSSVLLSRL
HFFLVKDPLLDSEGQSLTEENIFRECLTFENEVEMQESKIELQGIKENFCTISVKDEEYF
MLPAELEFCKPSNSRSDSVKNPSYLELRELLSLAPETMADEDMCKEVIKEDLKAEITYKV
EISRYCPIPQEVCSSNSRSMMEFCESAKYVPYLKDKVEVPLTPPCRQQRSWVNFLGTRLQ
EEPIPLSGNSILITEPSREYLECLVWQSEKYQDNMKSLLLVEHQTVELVNERHSLTELKE
LLPVEVEAPMLSSLEEGWWLHLGLNPVSTETLEKLNMDASNANSLLPTEVETFTRFTSHQ
LERWLEEKNSMTNQLLLSAERHRSDKAINLTMSPQSQFALNVSAISSAEIHSTNTSVEEL
TGGSIKKNKVGKAIYLLDQDNKTPKSSESVSCKDVSSKQDNSSSSEKPESFALATKWDDD
SDLSNFIMLRSKHTLTQREEKNYVDSPAKVLQPEEQHIHVHKEDSSVHETVRIEEKEQEN
EDSVIVHIQASESQCQAYCLLEEAATPVLKDLTHLHVLASVNWNFDSIKFDHTRFFLKQQ
EKLISDRFKEGNIDEKEIMLFRHAALVHLLVTVRDLLLTCGLDTALGYLSKAKDIYKNIL
ESCLNNIWRQLKIVQYSSQKKHETNPKITVLQCQMLNWMQSYGKEHSVKILIITRMDSER
EKAALIHSLSRVEGLKAMDLNSERKGTFLGCKDIISNLSRYSCVIVHNQQIGSDFPWTHF
SLVMEYDYSENSCWKNLCKNLNVTYMTFKTTLPETIQMGNHCGSFLLEVQIPYVFLTTEG
LLDMPDILQLLESKYSITFVERSSSYSLRLFGSRDQYVVLTIDECTAIFLQSMEELNYEK
SCDNVISKLMALSLQYTRCWIVFYSRERLTLEYSLRGYTLLNLVLIYATLIELTQESEDF
EVKVVLMPGIEETALVIRQIADNILIASSISPHEWLDKSWLSVLPSETEKCLLTFPCINP
LVAQFMLKKGSSLNKLFLASFDQLQELLPEVPKKVLKHFSDMTSSYSLNATAPRETAVKG
ESPPENRNNFNTFYPDYKQNHQSLELLGPSHVNSEAIIHPLNHHQSFFDPDLPSYMQKKS
CSSEVIMGRKQNSFAVPKDCEDVAHLDVMNSLHVQRQPSRMHYSSDHSSKNSEKVDFFAT
SSDYAPPESSKSFLEEFRDTTFKSPEILFNQTLWNDSSSTGPCDSFASEGFLSDFFVDPD
ELQSLNFHQTGRESKGKRKQTPPFLRIKEKNRTGSGFAEVPGFKKRRLTYERVPGRSDGQ
TRLKFF
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagctttaaagtatctctcaacagactatttatatgagagtacggcaaggcag
aagatttccatctggagattatcactttgctttcctccctgtttacatcaagatgaaaag
tatcatctcactggactctttgctgatgataagtataggaagccatggactagaatcact
tcaacacagaacatgattgatgtttcggtattggatcaatggaggaaaagtttatctgtg
gcagatttcctggaaaagaaacctatctcttctgtagcattcaatattagtaatgaatca
acagaagttattccaagttcaaatccctgctctcagactgatatagaaggacctttttta
cttatgaataatgtttttaagggagaatacacccaagagaaatatttgaagactgactat
gccactgaatttaaagaacaatggcaagatttatgtatgaaagaggaacttgtttttatt
gataatcttgaaaattttcgtaaaaatctgcctagttcatctgtacttctgagcagacta
catttttttttagtgaaagatccccttttagattctgaaggacagagtttaacagaagag
aacattttcagggaatgtttgactttcgaaaatgaagtggagatgcaagagagtaaaata
gaattgcaggggattaaagagaacttctgtaccatatctgtgaaagatgaagagtatttc
atgttgcctgctgagttagaattctgcaaacccagcaatagcagatcagattctgttaag
aatccatcatacttagaactgagagagttgttaagtttagctccagaaactatggctgat
gaggacatgtgtaaagaggtgataaaagaagatctcaaagcagaaattacatacaaagta
gaaatttccaggtactgtcctataccacaagaggtctgctccagtaatagcagaagcatg
atggaattctgtgagtcagctaaatatgttccatatctgaaagacaaagtggaagtacct
ttgactcctccatgcagacaacaaagatcatgggttaattttctgggcacaagacttcag
gaagaacctattcctctttctggtaacagtattttaattacagagccctctagggaatac
ttagaatgtttggtttggcaatcagagaagtaccaggataatatgaaatctcttttgctt
gttgagcatcagactgttgaacttgtaaatgagcgtcattcgcttacagaactgaaggaa
ttgctaccagttgaggtcgaagcaccaatgcttagctcactggaggagggctggtggctt
catttgggtttaaatccagtctccacagaaactttggaaaaattaaatatggatgccagt
aatgcaaacagtttgcttcctacagaagtagaaacgttcacacgatttacatcacatcag
ttagaaagatggcttgaagagaagaattccatgacaaaccaattgctgctttctgctgaa
agacatcggtcagacaaagcaattaaccttaccatgtcaccgcagagtcagtttgccctg
aatgtgagtgctatatcatctgccgaaattcacagtacaaatacatctgtggaagagctt
actggaggaagcataaaaaaaaataaagtaggaaaggcaatttatttattagatcaagac
aacaaaacccccaaatcatctgaatcagtcagctgtaaagatgtgtcttctaagcaagac
aactcatccagtagtgaaaagcctgaatcatttgcacttgctacaaaatgggatgatgat
tctgatctgagcaacttcatcatgctgagatctaaacatacactcacccaaagagaagaa
aaaaattatgtagatagtcctgcaaaagtgctacaacctgaagaacagcatatacatgtt
cacaaagaggacagttctgttcatgagactgtaagaatagaggaaaaagaacaagagaat
gaggacagtgtcatagtccatattcaagcatcagaaagccaatgccaagcatattgtctc
ttagaagaagcagccactcctgttctaaaagatttgacacatctgcatgtacttgcttct
gtaaattggaactttgacagcattaaatttgatcacacaaggtttttcttaaaacagcaa
gagaaactaatatctgatcgttttaaagaaggtaacatagatgagaaagagatcatgctg
ttcagacatgctgctctggtgcacctgctggtaacggttcgagatcttcttttaacatgt
ggcttggacacagcactaggttatttgtccaaagcgaaagatatctataaaaacatctta
gaatcctgtttgaataacatctggaggcagctgaagattgtacagtacagcagccagaaa
aagcatgaaacaaatcccaaaataacagtgcttcagtgtcaaatgttaaattggatgcaa
agttatggaaaggaacacagtgtcaagatactaatcataacaaggatggactctgagaga
gaaaaagctgccctcattcacagtttatctagagtagaaggtttaaaagctatggatttg
aattctgagaggaaaggaacctttttaggttgtaaagatatcataagcaacctcagtaga
tactcctgtgttattgtacataatcagcaaattggatctgacttcccttggacacacttc
tcattagtaatggaatatgattattctgaaaattcttgctggaaaaatctgtgcaaaaat
ctgaatgttacttacatgacttttaaaaccaccctccctgaaacaatacaaatggggaat
cactgtggttcctttcttctggaggtacagattccatatgtatttctgacaactgaaggt
cttcttgatatgccagatattcttcagcttttggaatccaagtacagcattacctttgtt
gaaagaagcagtagttactccttaaggctctttggaagtagagatcagtatgttgtgttg
acaatagatgaatgtactgctatctttttgcagagtatggaagaactaaattacgagaaa
tcctgtgataatgtaatatcgaagctgatggcattgtcgctccaatatacgcgctgttgg
attgttttctattccagagaaagactgactttagaatacagtctgaggggatacactctg
cttaaccttgtcttaatttatgccactctaattgaacttacacaggagtcagaagacttt
gaagtgaaggtagttcttatgccaggtattgaagagacagcactggtaattcgtcagatt
gctgacaacattttgatagcatctagtatcagtcctcatgagtggttggataaatcctgg
ctttctgtcttgccatcagagacagagaaatgcctgcttacttttccatgtatcaaccct
ctggttgctcagttcatgttaaagaagggatcttcgctgaacaagttgtttcttgcaagc
tttgatcaacttcaggaacttctgccagaggttccaaaaaaagttttaaagcattttagt
gacatgacatcttcgtacagcctaaatgccactgctccacgagaaacagcagtgaaaggt
gagtcacccccagaaaaccgtaataacttcaatacattctatccagattataaacaaaat
catcagtctttagagttgcttggaccatctcatgtaaattcggaagccataattcatcca
ttgaatcatcatcagagtttttttgaccctgatcttccaagctacatgcaaaagaaatca
tgttcctcagaagtaattatggggaggaagcagaattcctttgctgtgccaaaggactgt
gaagatgttgctcatttagatgttatgaattctcttcatgttcaaagacagccttcccgg
atgcactacagctctgatcattcttccaaaaactctgaaaaagtggacttctttgcaact
tccagtgactatgcacctccggagagctctaagagttttctagaagaatttagagacaca
acatttaagagcccagaaattctgtttaaccagaccctatggaatgactcttcatccaca
ggcccatgcgattcatttgcatctgagggttttctctctgatttctttgttgacccagat
gagcttcaaagtctgaattttcaccaaacaggtagagaatctaaaggaaagagaaaacaa
actcctccattcttgcggataaaagaaaaaaatagaacaggttcaggatttgctgaagta
ccaggcttcaaaaaaaggagattgacttatgaaagagtccctggaagaagtgatggacaa
acacgtcttaaattcttttga
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