Egretta garzetta (little egret): 104123236
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Entry
104123236 CDS
T05152
Symbol
CIITA
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104123236 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
egz01001
]
104123236 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
egz04054
]
104123236 (CIITA)
Enzymes [BR:
egz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104123236 (CIITA)
Protein kinases [BR:
egz01001
]
Serine/threonine kinases: Other
TAF1 family
104123236 (CIITA)
Pattern recognition receptors [BR:
egz04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104123236 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
104123236
NCBI-ProteinID:
XP_035746952
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MDSAFVSENGYLDLLHSDIDPFHLYTLLDLKSSGNEEGDFSADTEVDVSNYDQFNNIDFL
YTMENGENGDELYLCSNTIEAYARIAELAEYVLKDQQEKQVEDTFAGNLILDEMAAENTE
KFTDIKMQKCHKRTFLGSAESCSDASEPKYKKIVEVPAVSAGNGSFLPMPLNSHPASSTS
LTNQHVSFSVPATNAFERSFVIPGSSAPLLPECLTVGMKGSQENTGFADPSQQILNFVLG
NGTSDVLIYPGLEIFKEVQVPIIPSEEPFKRPKPVEAFCTSLRDYFRDVCKSVAMEREVT
LDHLFIDGRLVQSQTETKTGKNSVKAMEKELVTCSLQGKENAALKRSQIFQIPGSKDLET
KVIVVLXXXXXXXQDWSNGEFSQFEFVFWFDCKQISLPEKQYSLKDLLLDFFVKPQEGSK
EIFEYILQNPAKVLLVFDGFEGLHDHENVPRCSARQPEKDLCSIKELLSGLIQKKILNGC
TLLITARPKDKVYQYVSKVDKTIEIVGFSPQQRELYITKYFEGLPYSDNALKLIKECEYL
FSHCYSPVMCRFVCFLCETILEMGDKSLPSTLTTVFLKFVQQKIIPMQMDVTAMQNQESL
AVLAHIAWYLGEKHQSAMKSHPLHSKEVKEFALKYGFFLPFAFPRHSDSGEDEFGSTFSD
FVIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPYNWLDLVPRFLAGLLFLQDDPYFC
SLSNKDVKQSTKKQKTFLKYIRKLQINELCPERLLELLHCIYETQSNYLLQHVALRLKPD
LSFQGMFLTPPDVHVLCSILKISRKEFSLDLQNSSIDMQGLKDLVGLKNVASFRASLGDT
VRLWKSLEQAKDYELLKASTEKFVLDPFKAKTMKDISDLSDLVEMKEKMINSVQDASGCS
SYEIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFPSIQHLDLDALSENGIGDEGAKSL
SEVFPTLKSLEILNLSQNKITDVGAEKLATALPFLTSLKTLSLYNNSICDFGAENLAKAL
PLMTSLRVLDVQYNKITGVGAQKLTASLRKCPHIKNLVMWNPIIPYGVLEHLQQLDSRIS
V
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggattcagcatttgtgtctgaaaatggctatcttgatttgctgcacagtgatatcgat
ccatttcatctgtatactctccttgatcttaagtcatctggaaatgaagaaggtgacttc
tctgcagatactgaagttgatgtcagcaactatgatcagttcaataatatagatttcctg
tatacgatggaaaatggtgaaaatggggatgaattgtatctctgttccaacaccatagaa
gcttatgctagaatagctgaattagcagaatatgtgctcaaagatcagcaggagaagcaa
gtggaagacacttttgcagggaaccttattttggatgaaatggctgctgaaaacactgag
aaatttactgacataaagatgcagaaatgtcacaaacgaaccttcttaggctctgcagag
agttgctctgatgcttcagaacccaaatacaagaaaatagttgaagtccctgcagtgtct
gcagggaatggcagtttcttacctatgcctctcaacagccatccagctagctccacctca
ctaactaaccagcatgtgtccttttctgttcctgctaccaatgcgttcgaaagaagtttt
gtaattcctggatcttcagcccctttgcttccagagtgtctaactgttggcatgaaaggg
agccaagagaatacaggctttgcagatccttcacagcagatacttaactttgttcttgga
aatggcacatctgatgttttaatatatccaggtttagaaatattcaaagaagtccaagtt
cccataattccttctgaagaacctttcaaaagaccaaagccagtggaagctttctgtaca
tcacttagggattatttccgagacgtgtgcaaatctgtggccatggagcgtgaagtgact
cttgatcacctgtttattgatgggagacttgttcaaagccaaactgaaaccaagactggg
aagaacagtgtaaaagcaatggaaaaggagctggtaacttgcagtctgcaagggaaggaa
aatgcagcccttaaaagaagccaaatatttcaaatcccgggaagtaaagacttagagact
aaagtgattgtggtgctgnngnnnnnnnnnnnnnnnnnccaggactggtccaatggagag
ttttctcaatttgaatttgtattttggtttgattgcaaacaaataagcttgcctgagaag
caatatagcctgaaggatctgcttcttgatttttttgtaaaacctcaagagggaagcaaa
gagatatttgagtatatattgcaaaatcctgcaaaagtccttctggtttttgatggtttt
gaaggtttgcacgatcatgagaatgttcctcgttgctcggccaggcagcctgaaaaagac
ttgtgcagtataaaggagctgctttcaggcctcatccaaaaaaagatactcaatggttgt
accttattaattacagcaagaccaaaagacaaggtgtaccaatatgtgtccaaagtggat
aagactattgaaatagtaggattttcccctcagcagagagaattgtacataaccaaatac
tttgaagggttaccctacagtgataatgcactgaaattaatcaaagagtgtgagtaccta
ttcagtcattgttacagccctgttatgtgtagatttgtttgttttctctgtgagaccata
cttgaaatgggagacaaaagccttccttcaactcttactacagtcttcctgaaatttgtt
cagcaaaagataatacctatgcaaatggatgttacagccatgcaaaatcaagagagtctt
gctgtgctagcccatatagcctggtatcttggagaaaagcaccaaagtgccatgaaaagt
catccccttcattctaaggaagttaaagagtttgctctgaaatatggatttttcctgccc
tttgcattccccagacattcagatagtggagaagacgaatttgggagcacgttctccgat
tttgtcattcagaatttcttgggtgcgcttcaccttatgttagcagaagaaatcaaggat
aaaagtctaacaaaatacctgtcttttccatccaagaagaaaaaaccttataactggtta
gatttagtgcctcgatttttggctggattgttgttcctccaggatgacccctacttctgc
tccctttcaaacaaggatgtaaagcaatcaaccaagaagcagaagacattcttgaaatac
attagaaagctgcagataaatgagctctgtccggagaggttactcgagcttttacattgt
atttatgaaacacaaagcaattatcttttgcagcatgtggccttaaggctcaagccagac
ctgtcttttcagggcatgtttcttacaccacctgatgtccatgtactgtgctctatttta
aaaatatcaagaaaagagttttccttggatttgcaaaacagcagcattgacatgcaaggg
ctaaaagacttggttggcctaaagaatgtggcatcattcagggcctctcttggtgataca
gtcaggctctggaaatctttagaacaagcaaaagactacgagctgctgaaagcatcaaca
gagaaatttgttcttgatccctttaaggcaaagacaatgaaggacatcagtgacctttca
gaccttgtagagatgaaggagaagatgatcaacagtgtgcaagatgcatctggttgcagc
agctatgaaattcctgctatcaaaaacctcagaaaattagaatttgcgctgggtccagta
tgtggcctacagggattcctaaaactcgtggaaattcttgcagcatttccatcaattcag
catttagaccttgatgctctgagtgaaaatggcataggagatgaaggagcaaagagtcta
tctgaagtctttccaaccctgaaatcactggaaatattaaacttatcacagaataagata
acagacgtgggtgcagagaaactagctacagctcttcctttcttgacttcattaaagaca
ctaagcttatacaataatagcatttgtgattttggagcagaaaatcttgcaaaagctctt
cctctgatgacatctttaagagttctagatgttcagtataacaaaataactggtgttgga
gcccagaagctgactgccagcctacgaaaatgtccccatataaagaacttggttatgtgg
aatcccatcattccctatggagttctcgaacaccttcagcagctggactccaggatcagt
gtgtag
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integrated database retrieval system
