Egretta garzetta (little egret): 104123475
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Entry
104123475 CDS
T05152
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104123475 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104123475 (DROSHA)
03009 Ribosome biogenesis [BR:
egz03009
]
104123475 (DROSHA)
03036 Chromosome and associated proteins [BR:
egz03036
]
104123475 (DROSHA)
Enzymes [BR:
egz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
104123475 (DROSHA)
Messenger RNA biogenesis [BR:
egz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
104123475 (DROSHA)
Ribosome biogenesis [BR:
egz03009
]
Eukaryotic type
90S particles
RNase
104123475 (DROSHA)
Prokaryotic type
rRNA processing factors
104123475 (DROSHA)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
104123475 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
104123475
NCBI-ProteinID:
XP_035747196
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQLHPQQPSVQYQYDQQTAPPTTYSNPPTT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPAPPPVPNPSN
TPVPGTPAGQSTFXXXXXXXXXXXXXXXXYMMPPPAVPHPPPPPVIPQQVNYQPVYSAGY
SQQSFPPPNFSSYQHNSGSFQSSPANSGGGSSHFRHTGQYQGEKSQSDRRSPERSKHYDE
HRHREHGHIHGDRHRSANHGDRRDRGRSPDRRRQESSRHRTDYDRGRISPHHRSYERNRE
RERERHRHRDSRRSPSPDRSYKKDYKRAGSRSPSRERKRPRWEEDRERWSENQSSTKEKN
YTAIKDKESEENASEKNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRD
LYEKFDEELGKRQAKAKAARPPWEPPKTKLDEDLESSSDSDCDSEDDSSCSSSSDSEVFD
VIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRP
MTNNAGRLYHYRITVSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRF
NIDYTIHFIEEMMPENFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSICCPRFHFMP
RFVRFLPDGGKEVLSMHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVT
SPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHL
LANSPKVKQADKQKLSQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMML
PVLTHHVRYHQCLMHLDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIR
QPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVH
LYYLFPTLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANC
FEALIGAVYLEGSLEEAKQLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPV
LQKLTEFEDAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLF
IHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLES
FIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPL
YKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRF
IERKYRQELKEMRWEREHQEREPDETEEARK
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctgggcgaggatgtccccgtggtcaggggggaccaggagcaagaact
tcaacacagacttaccgccctcagaacctacggcagcttcacccacaacagccctccgta
caataccagtatgaccagcaaacagcccctccaacaacctattcaaaccctcccaccact
ggttacatgcctcccaggccagactttgtgccctatcctcctccagtgcccccttccaca
caaaatcccatcagccagtgtcccatgaggccaccatttccaaaccaccagatgaggcag
agcttcccggtgcctccctgcttccctcctgctcctccacccgtgccaaatcctagcaac
actcctgtgccgggaactcctgctgggcaaagcacctttcnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnncctacatgatgcctcctcctgcagtgccgcatccc
cccccgccaccagttataccacagcaagtcaactaccagcctgtgtactctgcagggtat
tcgcagcagtcgttcccgccgcctaacttcagcagctaccagcacaactctggctccttt
cagagcagccctgccaacagcggtggcggcagcagccattttcggcacacagggcagtac
cagggagagaagtcacaaagcgaccggcggtctccagagaggagcaagcactacgacgag
caccggcatcgtgaacacggtcacatccacggtgacaggcatcggtccgctaaccatggg
gatcggcgggatcgaggacggagtccagataggaggaggcaggaaagcagtcggcaccgg
acagattatgacagaggaaggatatcgcctcatcacagaagttatgagcgtaacagggaa
cgggagagggagaggcatagacaccgtgatagcagaagatcaccatcaccagacagatcc
tacaaaaaagattacaagagagcaggaagccggtctccaagcagagagagaaaaagaccc
cgatgggaagaggacagagaaaggtggtctgagaaccagagctccaccaaagagaaaaat
tatactgctatcaaagacaaagaatcagaggagaatgcatctgaaaaaaatgaagaggaa
gatgaggaattacttaagccagtctgggttcgctgtacccattctgaaagctattattcc
aatgaccctatggatcaagtgggagactctacagtggtaggaacaagtaagctccgagat
ctgtatgaaaagtttgatgaggagttaggaaagcgacaggcaaaagccaaagcagccagg
ccaccatgggagccaccaaagaccaagctggatgaagatttagaaagctccagtgactca
gactgtgactctgaagatgacagcagctgctctagtagttcagattctgaagtttttgac
gtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtctccatgaagaactgtgg
tacaatgatccaggacagatgaatgatggacctttgtgcaagtgcagtgctaaagcccga
cgaacaggaataagacatggcatttatcctggtgaagagcccattaaaccatgtcgcccc
atgaccaacaatgctggaagactataccactatcgaattactgtgtcacctcccacaaac
ttcttaacagacagacctactgttattgagtatgatgaccatgaatatatctttgaaggt
ttctcaatgtttgcacatgccccactaacaaacattcctctatgtaaagtaatcagattt
aacattgactatacaattcatttcattgaggagatgatgcctgagaatttttgtgtgaga
ggtcttgagctgttctcttcatatctattcaaagatattttggagctctatgactggaat
cttaaaggtccttcacttgaaaatgattctatttgctgccccagatttcacttcatgccg
cgatttgtgagatttcttccagatggaggaaaagaagtactctcgatgcaccagattctt
ctctacttgttacgatgcaataaagctctggtgcctgaagaggagattgccaacatgctt
cagtgggaagaactggaatggcagaaatatgcagaagaatgtaaagggatgatcgttacc
agccctggcatgaaacccagctcagtccgtattgatcaactggaccgcgaacagttcaat
cctgatgtaattactttccccattattgtccactttgggatacgacctgctcaactcagt
tatgctggtgatcctcaataccaaaagctgtggaagagttatgtgaagctgcgtcacctg
ctggctaatagtcccaaagtcaaacaggctgataaacagaaattatcacaaagagaggaa
gcactgcagaaaattcgtcagaagaacacaatgagacgtgaagtgactgtagagttgagt
agccagggattctggaaaacagggatacgctctgatgtctgccagcatgcaatgatgctt
cctgtcctcacccaccatgtccgctatcatcagtgtctgatgcatttggacaaattgata
ggctacacttttcgagataggtgcttgctgcagcttgccatgactcacccaagccatcac
ttaaactttggaatgaatccggatcatgccagaaattccttatccaactgtgggattcga
cagccaaagtacggagatagaaaagttcaccatatgcacatgagaaaaaaagggataaac
accctgataaatattatgtcccgtttgggacaagatgatccagctccttccaggattaac
cacaacgagcgtttagaatttctgggagatgctgtggtggagttcttaacgagtgtccac
ttgtactacctgtttcccactctggaggaaggaggattagctacataccgtactgccatc
gtacagaatcaacacctggccatgttggctaagaagctggaactagatcgatttatgctt
tatgctcatggtccagacctttgcagggaatcggatctccgccatgccatggccaactgc
tttgaagccctaataggagctgtttatctagaggggagcctagaagaagcaaaacaatta
tttggacgtttactcttcaatgacaaggacctgcgggatgtatggcttaattatccacta
cacccactccaactgcaggagtccaatactgataggcaactcattgagacctctccagtt
cttcaaaagcttacagagtttgaggatgcaattggagtcatctttacccatgttcggctt
ctagcacgtgcgttcactctgaggacagtaggctttaatcatctgactctaggccacaac
cagaggatggaattcctgggtgactccataatgcagttggtagccacagagtatttattc
atacatttccctgatcatcatgaagggcacttaacgctgttgagaagttctttggtgaat
aacaggacacaggccaaagtggcagaagagctgggtatgcaagaatttgccatcactaac
gacaagacaaaaagacctgtagctcttcgaactaagactttggctgatctgttggaatcc
tttattgctgccctgtacattgataaagatttggaatacgttcacactttcatgaacgta
tgcttttttccacggctaaaggagtttattttaaatcaagattggaatgatcctaaatct
cagcttcagcagtgctgtttgactctcaggacagaaggaaaagagccagacattcctctt
tacaagactctgcagacagtgggaccatctcatgccaggacatacacagtagctgtttac
ttcaaaggggaacgaataggatgtggtaaaggcccaagtattcagcaagcggaaatggga
gctgcaatggatgcacttgaaaaatataactttccccagatggcccatcagaaacggttc
attgaacggaaatacagacaagagttgaaagaaatgaggtgggaaagagagcatcaagag
agagagccagatgagactgaagaagcaaggaaataa
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integrated database retrieval system
