Egretta garzetta (little egret): 104124003
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Entry
104124003 CDS
T05152
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104124003 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egz03041
]
104124003 (PRPF4)
Spliceosome [BR:
egz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104124003 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
104124003
NCBI-ProteinID:
XP_009634600
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MPQSLLVLDQATKSKPAEESDAPPAKRAPIFYGSLEEKERERLAKGESGLLGKEGMKAAM
EAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT
LFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSREEYQQTWYHEGPRSLKTARLW
LANYSLPRAVKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRPLSYCHFS
PNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFHPKATISLDKKDVNLASCA
ADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILH
QEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGVNFSPNGY
HVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHP
GWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgccccagtcgctattggttttggaccaggccacgaagagcaagcctgcagaagagagc
gatgctcctccagccaagagagcccccatcttttacggcagtttggaggagaaggaaagg
gagcgtctggcaaaaggagaatcagggttgctaggaaaagaagggatgaaagctgcgatg
gaggctggcaacatcaacataagcagcggtgaggtctttgatctcgaagaccacatgagc
gagcggcaggcagaagtgctggctgagtttgagcgcaggaagagagcccggcagatcaac
gtgtccactgacgactctgaagtgaaagcctgcttgcgagcgcttggggagcccatcacg
ctcttcggagaaggccctgcagagaggagggagagattaagaaatatcctatcggtggtt
ggcacagacgcattaaaaaagaccaggaaagatgacgacaggtctaaaaaatccagagaa
gagtatcagcaaacctggtaccacgaaggaccacgcagtctgaaaacagcgaggctgtgg
cttgctaactactccctccccagggcagtgaagcgtctagaagaagcccggctgctcaaa
gagattccggaggcaaccaggacatcacagagacaggagctacacaaatccctgcgatcc
ttgaataacttctgcagtcagattggagatgatcgcccactgtcctactgccacttcagc
cctaattccaaactccttgctacggcctgttggagcgggttgtgcaagctctggtccgtg
cctgactgcaaccttgttcacaccttacgaggacataacaccaacgtaggagcaatagtc
ttccatcccaaagccaccatctccctagacaagaaggacgttaacctggcctcctgtgca
gctgatgggtctgtcaaactctggagccttgaaagcgatgaaccggtggcagatattgag
ggacacagcatgagagtggcacgtgtgatgtggcacccatctgggaggttcctgggtact
acctgctacgatcactcatggcgcttgtgggacttggaagctcaggaagagattcttcat
caagaggggcacagcaaaggggtctatgacattgcctttcacacggatgggtctcttgct
gggactggtggactggatgcttttggccgggtgtgggacttgcgcacaggacgctgtatc
atgtttctagaaggccacctgaaggagatctatggggttaacttctccccaaatggatac
cacgttgcaactggcagtggtgacaacacttgcaaggtatgggacctccgccagaggaag
tgcatctacaccattcctgcccatcagaacctggtgaccggggtgaaatttgaacccaat
catggtaacttcctgctcacgggtgcttatgacaacactgcaaagatctggactcaccct
ggctggtcccctttgaaaacgctggctggtcacgagggaaaggtgatgggactggacatc
tcccttgacggccagctgatagcgacctgctcctacgacagaaccttcaagctgtggaca
gctgagtag
DBGET
integrated database retrieval system
