Egretta garzetta (little egret): 104125161
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Entry
104125161 CDS
T05152
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egz03041
]
104125161 (DDX43)
Enzymes [BR:
egz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104125161 (DDX43)
Spliceosome [BR:
egz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104125161 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Mur_ligase_C
CMS1
HEM4
Motif
Other DBs
NCBI-GeneID:
104125161
NCBI-ProteinID:
XP_035748997
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MLIDDAVKRSGQNYSRGGTEKGRTLDFIKPENNPKQAVINWASLRENKAKYEAMKWADLP
PIEKNFYKESSRTASMSQDEVELWRKENNNIICDDLKEGEKRRIPNPVCKFEDVFEHYPD
IMANIRKVGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLTSQPVSKD
QRGGPGMLVLAPTRELALQVEAECLKYTYKGIKSICIYGGGDRKGQINVVTKGVDIVIAT
PGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMTSATWPD
GVRRLAKSYLKNPMIVYVGTLDLAAVNTVEQRVIVIAEEEKKAFMQYFIDSMKPKDKVII
FVGKKITADDLASDFGLQGIPVQSLHGNREQCDREQALDDFKKGKVRILVATDLASRGLD
VHDITHVFNFDFPRNIEEYVHRIGRTGRAGRTGEAITLVTKNDWRVASELIQILERAKQV
VPNELIAMAERYKQFQIRKEVDKDIQRPQRKPSK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgatgatgctgttaaaagatctggacaaaactacagtagaggtgggactgag
aaaggaagaactttggacttcatcaagcctgaaaataacccaaagcaagcggtgattaac
tgggcctctcttcgagaaaacaaagctaaatatgaagctatgaagtgggcagacttgcct
ccaattgagaaaaacttctataaagaatcgtccaggactgcatctatgtcacaagacgaa
gtggaactgtggcggaaagaaaataataatataatttgtgatgacttaaaagaaggtgaa
aagcgccgcattcccaaccctgtttgtaaatttgaagatgtatttgagcattatcctgat
attatggctaatataagaaaagttggttttcaaaagcctacaccaattcagtcccaggca
tggccgatcatactccaaggaattgatcttattggtatagcacagactggtactgggaag
acattagcgtacttaatgcctggattcattcacttgacttcacaaccagtatccaaagat
cagcgtggggggccaggaatgttagtccttgctcccactcgagaactggcacttcaagtg
gaggcagagtgtttgaagtacacatacaaaggaattaaaagtatttgcatatatggtggt
ggggaccgaaaaggacagataaacgtggttacgaaaggtgtggatattgttattgctact
cctggcagactgaatgatcttcaaatgaacaacttcataaatctgaagagcataacatac
ctggttttagatgaggctgacagaatgctggatatgggatttgaacctcagataatgaag
atcctgatagatgtgcggcctgacagacaaactgttatgacaagtgctacttggcctgat
ggtgttcgtcgcctagcaaaatcttatttgaaaaatcccatgattgtatatgttggcact
cttgacttagcagcagtaaatacagtagaacagagagttattgttatcgccgaggaggaa
aaaaaagctttcatgcaatacttcattgactccatgaagccaaaggataaggtcatcatt
tttgtggggaaaaaaattacagctgatgacttagcaagcgactttggtctccaaggaatt
ccagtacagtcacttcatggtaacagggaacagtgtgatcgggaacaggctttagatgac
ttcaagaaaggcaaagtcagaatactggtagctactgacttagcatcccgtggccttgat
gtgcacgatattactcatgtttttaattttgacttccctcgcaacattgaagaatatgtt
catagaataggtcgtactggaagagcaggacgtactggggaggcaataacgcttgtcact
aagaatgattggagggttgcatctgagctgattcaaattctggaaagagcaaagcaagta
gttcctaacgagcttattgcaatggcagaaagatacaaacaattccaaatcagaaaagaa
gttgacaaggatatacaaagacctcagagaaagccctcaaaataa
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