Egretta garzetta (little egret): 104125387
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Entry
104125387 CDS
T05152
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egz03036
]
104125387 (CHD6)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104125387 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Chromo
Helicase_C
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
BRK
Motif
Other DBs
NCBI-GeneID:
104125387
NCBI-ProteinID:
XP_035749243
LinkDB
All DBs
Position
Unknown
AA seq
2685 aa
AA seq
DB search
MIMKIQKKEKQPPSLKALSCSPMSDAWERKAQDPFASSEEQDEVPLQVTVTDTDTGGQCQ
CPEEEPDGAPQKRTSTQNGVQDSGGGGTGVKKKRKKKDLGEPEGGEKAAMEVKPKRRREP
KEPKEPKKAKEPKKTKEPKQREVAKKPRKPREPKTPKEAKDKKNSSEPTPRARPKKSSKD
TPVEKKKKGKRKNEIPVDSLDLDQDLLSPSAQSPEESAESADSQKRRSGRQVKRRKYNED
LDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPG
GLAFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDL
FNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEAL
QIPPEIKHMERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMG
LGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMI
QQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCK
LLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVK
KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQH
NMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLID
KLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPD
SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT
RNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVGWLSEEEPGAYGALMDEEDEGSKFC
EEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTD
AKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRA
ECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFI
WDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHD
DSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVD
WWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDTAE
RGSMEKEESSGEKVEGLPKQEDIVTAGVGEASEKRAQDGSDSDRSCWPVSSALTARLRRL
VTVYQRCNRKELPPRAEILVPGNHGYWLQDEMFRRASEMDSVNKEMQKRWTRREQADFYR
TVSSFGVIYDQEKRIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGP
PDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKH
DRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGLPGPETLCCLYQTNSKLY
SSPLYSQVDRTCENEAEGQIKLDAIDNTMSQAGGSPPDASCETFMSKVRDIISSNYDESS
LPESLVCMMYDEKACNSEQSSLARDSPSCTDVGSSVAKLSEGKLEGDEDPSSCDADAMRE
TPFLVGLQGGCDRMDGQNEEAEPSPSTPESDPSRSVPAELCEALQQKGDQASPAPVLPEH
GAMEGVISMGLYSPSLRNYEIKVPSEQRFLNLLQEKGVEAKSGPSQSHSEEDEEEEEDDD
NSEAAADVAEGLSGPRTRVGSDPKANELGGEEQSSGLPTPEDTCPEDVNGERESLGLGTP
EGLGEPGPEGREDRGLDDESTLQHLPGQAQSQAFSLPAPLLGAPGAEPPHAGGEVWGRGA
EGQAGCREALHSEPQGVKQEECEHRDEGKKASSSQSQDGPEKYLEEESKSSASVLPGEND
DLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILKGKWPSSSQQFETQSLL
AAPVVASNAGSRNSFAESEAPDPSFNNGVLISQVQKEGFLTPAFAKDERKHRRPYEFEME
RDAKQRSLEQLAATHVHPPIVLNGWRDAAVDLSRASDGSPGNSSPFPLNTNMPKLGTVNT
LQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLIFLKERPL
PTRLQDVQEDQPQPPQNSSLPEGPVAATSTPQPVPAAGSQAEKAVPNKSLLDWLRQQSDY
TLDIPGFGTNFSDKPKQRRQRCKDPSKLDINSLTGEERVPVVHKGTGRRGYLPESKFNRI
LTEPVLRDAGPRRRGRRPRSELIKGPGIVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQ
GIPLTGLVGFPAGFAAVPAGEDVKSTLSMLPMMLPGMAAVPQMFGVGGLLNPPMTTTCTA
TAPTSLTSTTKSGSASAEKATEDKPSSQDVKKETPSEDKPGPSSFSNQTESAITTSSPVA
FNPFLIPGMSPGLIYPSMFLSPGIGMALPGIQQTRHSEAANLESQKRKRKKAKGESANPE
PETVSLPEKEAANSQNCTEQTLPSSAAREQDGPAEEERDAAHDTN
NT seq
8058 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaaaaaagaaaagcagccgccaagcttaaaagcgctgagctgc
tccccaatgtcggatgcttgggagcgcaaggcgcaggacccctttgccagcagcgaggag
caggatgaggtgcccctccaggtgacagtgacggacacggacacgggcggccagtgccag
tgccccgaggaggagcccgatggggctccccagaagcggacaagcacccagaatggcgtg
caggacagtgggggcgggggcacgggggtgaagaagaaacggaagaaaaaggatctggga
gagcctgaagggggagaaaaagcagctatggaggtgaaaccaaagaggaggagagagcct
aaagaaccaaaagagcctaaaaaggctaaggagcccaagaagacgaaggagcccaagcag
agggaggtggccaagaagccccggaagcctcgggaacccaaaacccccaaggaggctaaa
gacaagaagaacagctctgagcctacccccagagcaagacccaagaagagcagcaaggac
acccctgtggaaaagaagaagaaaggaaagaggaaaaatgagataccagtggacagtttg
gatttggatcaggatctcctgagcccatccgcgcagagcccagaggagtctgcggagtcg
gccgacagccagaaacgccgctcaggacggcaagtgaagaggaggaagtacaacgaggac
ctggatttcaaggtggtggatgatgatggcgagacaatagctgtgctgggagctgggcga
acctcagcgctctccgcctctactctggcatggcaggcagaggagcctcccgaggatgat
gccaatatcattgagaagatccttgcctccaggatggtgcagaaggaggctcatcctgga
ggcctggcatttgagatggaggagttctacgtcaagtacaggaacttctcctacctccac
tgtaagtgggcaactctggaggagctggagaaggaccccaggatctcccagaagataaag
cgcttccggaacaagcaggctcaaatgaagcatatttttacagagcctgatgaggattta
ttcaacccagactacgtggaggtagatcgaatcctggaggtggctcacaccaaggaccct
gacaccggggaggaggtgactcactacctggtgaagtggtgctcactgccctatgaggag
agcacttgggagctggaggaggatgttgacccagggaagattaaagagtttgaagccctc
caaatccctccagaaatcaagcacatggagcgcccagcatctgagtcctggcagaaactg
gagaagtcccgggagtataagaacagcaaccagctgcgggagtatcagctggagggaatg
aactggctgctctttaactggtataacagaaagaactgcatcctggctgacgagatgggg
ctggggaagacaatccagtcaatcaccttcctctcagaaatattcctgatgggcatccat
ggccccttcctcatcatcgcacctctctccaccatcaccaactgggagagggagttccgc
acctggacagagatgaatgccattgtgtaccatggcagccagatcagccggcagatgatc
cagcagtacgagatggtgtacagggacacacagggtaaccctctccctgggatcttcaag
ttccaggtggttatcaccacctttgagatgatccttgctgactgcccagagctgaagaag
atccagtggcgctgtgtggtcattgacgaggcacatcgcctgaagaacaggaactgcaag
ctcctggaggggctgaagctcatggccctggagcacaaggtgctgctgacagggaccccc
ctgcagaactcggtggaggagctcttcagcctcctgaatttcctggagccacagcagttc
ccctcagagacagccttcctggaggagtttggagacctgaaaacagaggaacaggtgaag
aagctgcagtccatcctgaagcccatgatgctgcgacggctgaaggatgatgtggaaaag
aatctggcacccaagcaggagaccatcattgaggtggagctgaccaatatccagaagaaa
tactaccgggctatcctggagaagaacttctccttcctctccaagggtgccaaccagcac
aacatgcccaacctcatcaacaccatgatggagctgcggaagtgctgcaatcacccgtat
ctcatcaacggggcggaggagaagatcctggaagacttccgtaaaacgcacagcccggag
gcaccagacttccagctgcaagcaatgatccaggcagccgggaagctggtgctcattgat
aagctgcttcccaagctgattgccggtgggcacaaggtgctcatcttctcccagatggtg
cgctgccttgacatcctggaagactatctcattcagaggcggtacacctacgagcgcatt
gacgggcgggtgcgtgggaacctgcgccaagctgccatcgaccgcttctgcaagcccgac
tcagatcgcttcgtctttctcctgtgcacacgggcaggcgggctgggcatcaacctcacc
gctgctgacacctgcatcatctttgattcggactggaacccacagaacgacctccaggct
caagctcgctgccaccggatcgggcagagcaaggcggtgaaagtctatcgcctcatcacc
aggaactcctacgagcgggagatgtttgacaaggccagcctgaagctgggcctggataag
gctgtgctgcaggacatcaaccgcaagggcagcaccaatggggtaggttggctgtcagag
gaagagccgggtgcctacggtgctctcatggacgaggaggatgaaggatcaaagttctgt
gaggaagacattgatcagatcctccagcgcaggacacagaccatcacgatccagtctgag
gggaagggctccacctttgccaaggccagctttgtagcatcaggaaacagaactgacatt
tccttagatgaccccaacttctggcaaaagtgggccaagatagcagagcttgatacagac
gccaagaacgaaaaggagagcctggtcattgacaggccccgggtgcggaagcaaaccaaa
cactacaactcctttgaagaggacgagctgatggagttctctgagctggacagtgactca
gacgagcgacccacgcgctcgaggcgcttcaacgagaagacacggcggtacctgcgggct
gagtgcttccgcgtggagaagaacctgctcatattcggctggggacgctggaaagatatc
ctgacccacgggcggttcaagtggcacctgaatgagaaggacatggagatgatttgtcgg
gccttgctcgtctattgtgtcaaacactacaagggggatgagaagattaagagttttatc
tgggatctcatcacgccaacgaaggacggccagaaccaggctctgcagaatcactcaggc
ttgtcagcaccggtgcccagaggcaggaaggggaagaagacgaagaaccagatgctgctt
cccgagatcaagaacgcggactggctcgccacctgcaaccctgaggtcgtcctgcatgat
gacagctacaagaagcacctcaaacagcactgcaacaaggttctgctgcgggtgcgaatg
ctctactacctgaaggctgaagtgctgggggaggccgcggacaaagcctttgaggggacc
cctgccagggagctggacgtgctgctgccagacattgactatgtggagatcccagtggac
tggtggaacgctgaagctgataaatccctgctcatcggcgtcttcaagcatggttacgag
aggtacaatgccatgcgggcggacccagcactgtgctttctggagaaggtgggcatgccg
gatgagaagctgctctctgcagagcagggcgtcagcgacggggcccaggacactgcggaa
agaggcagcatggagaaggaagagagcagtggagagaaggtggaggggctaccaaagcag
gaggacatcgtgactgctggggtgggcgaagccagtgagaagcgggcccaggatggctcc
gactcagacagatcctgctggcctgtctcatctgccctcacagccagactgcgaaggctc
gttactgtctaccagcgctgcaaccgcaaagagctgcctccccgcgctgagattctggtg
cccggtaaccatggatactggctgcaggacgagatgttccggagagcctctgagatggac
tcggtgaacaaagaaatgcagaaaaggtggaccaggagggagcaggcagatttctaccgc
actgtctcctcctttggggttatctatgaccaggagaaaaggatctttgactgggcccag
ttccgagccatctctcgactggagaagaagacagatgagagcctggagaagtacttctat
agctttgtggctatgtgcaagaatgtctgtggtctcccactgtggaaagaggatggtccc
ccagaccctgacatctacgtggagcccatcacggaggaacgtgcggccagaaccctctac
cgcattgagcttctgcgaaaggtgcgcgagcaggtgctcaagtgcccgcagctccacgag
cggctcaagctgtgccggccgagcctctacctgccggtgtggtgggagtgtggcaaacac
gatcgggacctgctgatcggcaccgccaagcatggcctgaatcgcactgactactacatc
atgaatgacccccagctgtcttttttagatgcatacaggaactatgcccagcataaaaga
acggggctcccaggcccagaaaccctgtgctgcctttaccagactaactccaaactctac
agttcccctctgtacagccaggtggaccggacttgcgagaatgaagcagagggccagatc
aagctagacgccatagacaacactatgtcccaggctgggggcagtccaccggatgccagc
tgtgaaacgttcatgtctaaagtccgggacatcatctccagtaactatgatgagagttct
ctgccagagtcgttggtgtgcatgatgtacgatgagaaggcctgtaacagtgagcaaagc
tcccttgcccgagacagcccaagttgcacagatgttggaagtagtgttgctaaactctct
gagggcaagctggagggggatgaggatccgtccagctgcgatgcagatgccatgagagag
actcccttcctagtgggtctgcaggggggctgtgaccgaatggacggtcagaacgaggaa
gccgagccttcaccttctacccctgaaagcgacccttcacggagtgtcccagcagagctc
tgcgaagccttgcagcagaagggagaccaggccagccctgcgccggtgttgcctgagcac
ggtgccatggaaggggtcataagcatggggctttacagtcccagtcttcgtaactatgaa
ataaaggttccttctgaacagaggttcctcaatctgctgcaggagaaaggagtggaggca
aagtcagggccaagtcagagccacagcgaggaagatgaggaggaagaagaggacgatgat
aactctgaggcagcagcagatgttgctgaaggcttgagtggtcccaggaccagagtcggt
agtgatcccaaggctaatgaactggggggcgaggagcagagctctggcctccccacacct
gaggacacttgcccagaagatgtgaatggcgagagagagtccctggggctggggacacct
gaagggctgggggagcctgggccagagggcagggaggaccgtggcctggatgacgagagc
accctgcagcacttgccgggccaggctcagagccaggctttcagcctgcctgcacctctg
ctgggggccccaggggcagagcccccccatgccgggggtgaggtctggggccgaggggct
gagggtcaggcaggctgcagagaggccctacactctgagccccagggggtgaagcaagaa
gagtgtgagcacagagatgaagggaagaaagccagcagcagccagagtcaagatggtccg
gagaagtacttggaggaagaaagcaagagttctgcttctgttctgcctggggagaatgat
gaccttcaggatgcccgggcaccgaccatagcacagctgctgcaggagaagacgctttac
tccttctctgagtggcctaaggaccgtgtgatcatcaaccgcattgacaacatctgccat
gccatcctgaagggcaagtggccttcctccagccagcagtttgagacacaaagcctgctg
gcagctccagtggtagccagcaatgccggcagcaggaacagctttgccgagtcagaagcc
cctgatcccagcttcaataacggggtgttaatctcacaggtacaaaaggaaggtttcctg
acccctgcctttgcaaaagatgagcggaagcacaggcggccctatgaattcgagatggag
agagatgccaaacagaggagcttggagcagctagcagcaacccatgttcatccacccatt
gtgctgaacggctggcgtgacgcagcggtggacttgtccagagcctctgatgggtcccca
gggaactcctctcctttccccctgaacacaaacatgcccaaactggggaccgtgaacacc
ctccagggctccctgggcatggacttgtctggcatcctccaggcagggttaatccatcct
gtcacgggacaaattgtaaatggaagcctccgaagagatgatgctgccatgaggaggaga
cggggcaggagaaaaaatgtagaagggatggacctcatcttcttgaaagagaggcctctt
ccaaccaggctgcaggatgttcaggaagaccagccacagcccccccagaacagttccctc
cccgaagggccggttgctgctacctcaactccacagccagtcccagctgcaggcagtcaa
gcagagaaggctgtcccaaataagagtctcctcgactggctccgtcagcagtccgactac
acactcgacattcctggctttggcacaaatttttcagacaagcccaagcagaggaggcaa
cgctgcaaggaccccagcaaattggacattaactcactcacgggagaggagcgggtgcct
gtggtacataagggtaccggacggcggggctacttaccggaaagcaaattcaaccgcatc
ctgaccgagcccgtgctccgagatgcagggccccgccggagggggagaaggccccgaagt
gaactcattaaaggccctggcattgtagcagattcttcttctggaatgggaccattgttc
atgaacggactgattgctgggatggatctcgtaggacttcagaacatgagaaacatgcaa
gggatccccctgaccgggctggtcgggtttcctgctggatttgcagcagtgcccgccggt
gaggatgtgaaaagcaccctgagtatgttgcccatgatgctgccaggcatggctgccgtc
ccacagatgtttggcgttggaggacttctcaacccccccatgacaactacttgtactgcg
actgctccaacttcgttaacaagcacaacgaaaagtggttcggccagcgcagagaaagct
actgaggataaaccaagtagccaggatgtgaaaaaagaaactccctcagaagataagccc
ggccctagttcgttttctaatcagacagaatccgcaataactaccagtagtcctgtagct
tttaacccgttccttatcccagggatgtctcctggactgatttatccctccatgtttctt
tctcccggcatcggcatggcgctgcccggcatacagcaaaccaggcactcagaggcggcc
aacctggagagccagaagcggaagaggaagaaggcaaagggggagtcagcaaacccagag
ccagagactgtctcgctgccggaaaaagaagctgccaacagtcaaaactgtacggagcaa
acactgccctcgtcggcagcaagagagcaggatggaccagcagaggaggagcgcgatgcg
gctcacgataccaattag
DBGET
integrated database retrieval system
