Egretta garzetta (little egret): 104125581
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Entry
104125581 CDS
T05152
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egz03041
]
104125581 (RBM39)
Spliceosome [BR:
egz03041
]
Common components
Common spliceosomal components
General mRNP proteins
104125581 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
104125581
NCBI-ProteinID:
XP_009636350
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccacgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacaggaagaggagcagaagcaaagaacgcaaacggagccgagat
cgggaaaggaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccgttctagaagtagagatcgacgattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgacgctccagaagcaaaagtcccttcagaaaagacaagagccctgttagagaa
cctattgataatcttactcctgaagagcgggatgctcgaacagtattctgcatgcagctg
gctgcaagaattcgaccgagagacctggaagaatttttctctacagtagggaaggttcgc
gatgtacgaatgatttcggatagaaattccaggcgttcaaagggaattgcttatgtagaa
tttgttgatgttagttcagtgcctctggcaataggactaactggacagagagtcttgggt
gtaccaatcatagtacaagcatcacaggcagagaaaaacagagcagcggcaatggcaaat
aatctgcagaagggcagtgctggtcctatgaggctctatgtgggatcattacacttcaac
ataactgaggatatgcttcgaggaatttttgagccatttggcaggatcgaaagcattcag
ctgatgatggatagtgaaactggacgctcaaaaggatatggatttattacgttttcagac
tctgagtgtgccaaaaaggccttagaacaactcaatggatttgagttggctggtaggcca
atgaaggttggacatgtaactgagcgcactgatgcttcgagtgctagttcatttttggac
agtgatgaattggaacggactggaattgacttgggaacaactggtcgccttcagttgatg
gcaagacttgcagaaggtactggtttgcagattcccccagctgcacagcaggctctgcag
atgagcggatctttggcatttggagctgtggcagatttgcaaacaagactgtctcagcag
aatgaagttctggctgcagctgcttctgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggatacagaaattaaagac
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctatgtagacaaaaac
tcagctcagggcaatgtctatgtcaaatgtccttcgattgctgctgccattgcagctgta
aatgcgttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacgtaccatagccttttcccagactctatgactgcaacccaactactggttcctgtt
cgacgatga
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