Egretta garzetta (little egret): 104125624
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Entry
104125624 CDS
T05152
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104125624 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egz03021
]
104125624 (TAF5)
03036 Chromosome and associated proteins [BR:
egz03036
]
104125624 (TAF5)
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104125624 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104125624 (TAF5)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104125624 (TAF5)
STAGA complex
104125624 (TAF5)
TFTC complex
104125624 (TAF5)
SAGA complex
104125624 (TAF5)
SLIK complex
104125624 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
DSE1_N
Beta-prop_Aladin
PAC11
Beta-prop_SCAP
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_NOL10_N
WD_LRWD1
Tricorn_2nd
DNAI3_WD
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
eIF2A
RAB3GAP2_N
VID27
Motif
Other DBs
NCBI-GeneID:
104125624
NCBI-ProteinID:
XP_009636390
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MKFQELICPGSIGGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRA
ELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGN
ETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDA
MVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKS
KKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLT
AVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTAS
ELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS
PYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLW
DVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV
YALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYM
TKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcaggaactgatatgtccaggttccattggaggaggtgttgttgtggaagat
cagccagatgtgagtgcagtattgtctgcctacaatcaacagggggacccgactctgtac
gaggaatactacagtggattaaaacacttcattgagtgttccctggactgtcatcgagca
gaattgtctcagctgttttatcctctctttgtgcacatgtatttggagttggtctacaat
caacatgagagtgaagcaaagtcgttttttgaaagatttcatggggatcaagagtgctat
taccaagatgacctgcgtgtgttatctagcttaaccaaaaaagaacatatgaaaggtaac
gagaccatgctggatttccgaacaagcaagtttgtgctgcgtatttcccgtgactcttac
caactcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaacatcgttcag
gaacatctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgcc
atggttggaagcttggctggggaggcaaaacgggaggctaataaagcaaaggttttcttt
ggcttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaa
aatgaggaaggaaagccaaagaagaaaaaacctaaaaaagatagcgtagggtcaaaaagt
aaaaaacaagaccctaatgctcctccccaaaacagaattcctttgcctgagctgaaagac
tctgacaagctggataaagtcatgaatatgaaggaagctgcaaggcgtgtgcgtcttggc
ccagagtgcctgccctccatctgtttctacacattccttaatgcttaccagggtctgact
gcagtggatattacagatgactctagcatgattgtaggaggctttgctgactctactgtc
agagtgtggtccgtgactccgaaaaagctacgtagtgtgaaaacagcagcagacctcagt
ctcatcgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagt
gagttgaagattctgtatggtcacagtggacctgtctatggcaccagcttcagtcctgat
aggaactacctgttgtcctgttctgaggatggcactgtccgattgtggagtctccaaaca
ttcacgtgtttggtgggatataaaggacacaactatccagtatgggatacacaattctct
ccttatggttattactttgtgtcagggggacacgacagagtggctcgtctgtgggcaaca
gatcactaccagcctttgcggatatttgctggccatcttgctgatgtgacgtgtacccga
tttcatccaaactccaactatattgccacgggctcagcagacaggactatacggctctgg
gatgttttgaatggcaattgtgtaagaatattcactgggcataagggaccaattcattca
ttggcattttctcctaatggacgattcctggctactggagcaacagatggaagagttctg
ctgtgggatattggacatggcttgatggttggagaattgaaagggcacactgacactgtc
tacgcactcagattcagtagagatggggaaattttagcatcaggctcaatggataacaca
gttcgtctgtgggatgctgtgaaggcatttgaagatttagaaaccgatgactttactaca
gccactggacatataaacttgcctgaaaactcccaggacttgttactaggtacatacatg
accaaatcaaccccggttgtacacctccatttcacacgcagaaacttgctgctggctgca
ggagcctacagttcacagtaa
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integrated database retrieval system
