Egretta garzetta (little egret): 104125636
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Entry
104125636 CDS
T05152
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X2
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03410
Base excision repair
egz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104125636 (POLL)
03450 Non-homologous end-joining
104125636 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egz03400
]
104125636 (POLL)
Enzymes [BR:
egz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104125636 (POLL)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104125636 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
104125636 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
LIG3_BRCT
PTCB-BRCT
HHH_5
NTP_transf_2
HHH
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
104125636
NCBI-ProteinID:
XP_009636402
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MEPQGIVKAFPKRKKVRDDPGKSIPPKIPKEEGTEMPEEWLKPVTAYVLQAGIGQARAEI
FHKQIVQNGGVVRNQLSSEVTHVIVAEDMDGDRAFRLLKLTKQPSGLQLVKASWLSACIR
DQKLLSTTGYSVFIPHRHLIHGQHPEEGELLKEQQQQVLGSEEIQSPAEERAVKPNTTEA
QVEDSSQRGLGTLGQQQLAEKFSDDEDSEGEDASVTQGDLEALISGRYPAKSSEETSDSS
SAVAQPASKWVCAHSSNSKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSY
HKPVTSYQEACKIPGIGKRMAEKIMEILESGHLRKLDHISESVPVLELFSNIWGAGVKTA
QMWYQQGFRTLDDIRTKATVTRQQAVGLKHYTDFLERMPREEAAEIEQTVREAALALKPG
LVCVACGSYRRGKSTCGDVDVLVTHPDGQSHRGVFNKLLDSLRRSGFLTDDLVTQEDNGD
QKKYLGVCCLPGPARRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSE
HSLSLAVVRGPGGVKVSSGHALPTPTEQDVFIQLGLPYREPSERDW
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggagccacaagggattgtcaaagcctttcccaagaggaagaaggtgagggatgaccca
gggaaaagcatccctccaaagatcccaaaagaggaaggaacagagatgcctgaggagtgg
ctgaaaccagtcaccgcctacgtgttgcaagctggcatcggccaagccagggcagagatc
ttccacaagcagattgtccagaatgggggtgttgtacgcaaccagctctcctcggaggtg
acgcacgtcattgtggctgaagacatggatggtgatcgggcctttcggctccttaaatta
accaagcaaccttcagggttgcagctagtgaaggcatcctggctaagcgcttgtattaga
gaccagaagctgctgagtaccactggctacagtgtctttatccctcacaggcatctgatc
catggccagcacccagaagagggagaactgctgaaagagcagcagcagcaggtcctgggc
agcgaagagatccagtccccagcagaggagagagcagtgaaaccaaatactactgaagca
caggtggaggattcctcacagcgaggcctgggcacccttggacagcagcagctggctgag
aaattctctgatgatgaagacagtgaaggagaagatgctagtgtcacccagggggatctg
gaagcattgatttctggccgctaccctgcaaaatcatcagaggagaccagtgacagctct
tctgcggtggcccagcctgccagcaagtgggtttgtgcccattcctccaacagcaagaag
gagaatcacaaccagtgcatcacagagaagctggaagtgctggcaaaggcctattctgtc
cagggggacaagtggagagctctgggctactccaaagccatcaatgcactcaagagctac
cacaaaccagtcacctcctaccaggaggcctgtaaaatccctgggattgggaagcgaatg
gcagagaagatcatggagatcttggagagtgggcacctgcgcaagctggatcacatcagt
gagagtgtgcctgtgctggagttgttttccaacatctggggagcgggggtcaagacagct
cagatgtggtaccagcagggtttccggacgctggatgatatccgcaccaaggcgactgtc
acccgccagcaagctgtggggctgaagcactacacggatttcctggagcgcatgccccgg
gaggaagctgcagaaatagaacagaccgtcagagaagctgccctggccctgaagcctggg
ctcgtgtgtgtggcatgtggctcctaccgtcgggggaagtccacctgtggagatgtggat
gtgctggtcactcacccagatgggcagtctcaccgtggggtgttcaacaagctgcttgac
agcctccgcaggagcggcttccttacggacgacctggtgactcaggaggacaacggtgat
cagaagaagtacctgggggtgtgctgcctccctgggccagcccggcgtcaccgccggctt
gacatcatcgtggtgccttacagtgagtttgcctgcgccctgctctacttcaccggctca
gctcacttcaaccgctccatgcgggccctggccaagaccaagggcatgagcctctcggag
cattccctcagcttagccgtggtgcgaggccctggaggtgtcaaggtgtcatctggccat
gctctgcccactcccactgagcaagatgtcttcattcagctggggctgccttaccgggag
ccctcagaacgggactggtga
DBGET
integrated database retrieval system