Egretta garzetta (little egret): 104125834
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Entry
104125834 CDS
T05152
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egz03009
]
104125834 (DCAF13)
04121 Ubiquitin system [BR:
egz04121
]
104125834 (DCAF13)
Ribosome biogenesis [BR:
egz03009
]
Eukaryotic type
90S particles
Other 90S particles
104125834 (DCAF13)
Ubiquitin system [BR:
egz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104125834 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
MIOS_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
KNTC1_N
Beta-prop_WDR35_TULP_N
WD_LRWD1
RMC1_N
Motif
Other DBs
NCBI-GeneID:
104125834
NCBI-ProteinID:
XP_009636614
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MGSSPFPSLVASTGVTPVRQRLPRPAESQTRHSTSDIALQSLRAELGVVVGHPAGTPGLL
LPRLLFTVFCPYCCRFPGVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFLSSLDGH
RDGVNCMAKHPKSLSTVLSGACDGEVKIWNLTTRQCIRTIQAHEGFVRGMCARFCGTSFF
TVGDDKTVKQWKMESPEHGEEEEPIHTILGKTVYTGIDHHWKEAVFATCGHQVDIWDEQR
TSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRKSTPLKKVILNMRTNTLC
WNPMEAFVFTAANEDYNLYTFDMRFLESPVTVHMDHVSAVLDVDYSPTGKEFVSASFDKS
VRIFPVDKGRSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKLGVLAP
REKAAMNYNQKLKEKFQYHPQIRRIAQHRHLPKSIFCQIKEQRIMREARRRKELNRRKHS
KPGSMPFVSERKKHIVAVVK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgggctccagccccttccccagtctggtggcctccactggcgtcacgccagtacgtcaa
cgccttcctcgccctgctgagtcccaaactagacacagtacttcagacatagccttacaa
agcctgagggccgagctgggggtggtggtcgggcaccccgccggtactccggggttgctc
ttacctaggttgctcttcacagtcttttgcccttactgctgccgctttcctggtgttcca
agaaactatgaccctgcgttgcatccgttcgaggttccacgagagtacacaagagcactg
aatgcaacaaagctagaacgtgtgtttgcaaaaccttttcttagctcccttgatggccac
agagatggagttaattgcatggccaaacatccaaagagtttgtctacagtgctgtctgga
gcttgtgatggagaggttaaaatctggaacttgaccacacgacagtgtattcgtactatc
caggcccatgaaggctttgttcgaggcatgtgtgctcgtttctgtggtacttcattcttt
actgttggtgatgacaaaactgtgaagcagtggaaaatggagagcccagaacatggagaa
gaagaagaacctattcatacaattcttggaaagacggtgtatacaggcattgatcaccac
tggaaggaagctgtttttgccacctgtggccatcaagtggatatttgggatgagcaaagg
acaagtcccatgtgttctctgacatggggttttgacagcataagcagtgtaaaatttaat
cccattgagacataccttttgggaagctgtgcttctgacagaaatattgtgctatatgat
atgagaaaatcaacgccgttaaagaaggttatcttgaacatgaggacaaatacgctgtgt
tggaaccccatggaggcttttgtttttactgcagcaaatgaagattacaacttatatact
ttcgatatgcgctttcttgaatcacctgtgactgtgcatatggatcacgtgtctgctgtt
cttgatgtggattattcacccaccgggaaagaatttgtctctgccagctttgataagtct
gtccgcatttttcctgtagacaaaggtcgcagcagggaggtatatcatacaaaacgaatg
cagcacgtcatcactgtaaaatggacttcagataacaaatatattctgtgtggctcagat
gagatgaatattcgtctgtggaaagctaatgcttctgaaaaattgggagtgcttgcacca
cgagagaaggcagctatgaattacaatcagaagctgaaggagaagttccagtatcaccca
cagatcagacgcatagctcaacaccgtcacttgcctaaaagcatattttgccaaatcaag
gagcaacgtatcatgagagaagctcgtcgacgaaaggaactgaatcgtcgtaagcacagc
aaaccaggatctatgccatttgtgtcagagaggaagaaacatattgtggcggtagtgaag
taa
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