Egretta garzetta (little egret): 104126070
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Entry
104126070 CDS
T05152
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104126070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104126070
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104126070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Erf4
TSX
Motif
Other DBs
NCBI-GeneID:
104126070
NCBI-ProteinID:
XP_035749940
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MKKKLVDVINKMRINPGHYRSSSGPAFHVQSSSKTPKFGLSNKFDTEFPSVLTGKVAPEE
FKTSISRVNTCLRKNLPVNVKWLLCGWLCCCCTLGCSLWPVVCLNKRTRRSIQKLLEWEN
NRLYHKLGLHWKLSKRKCETSNMMEYMTPLVSKKMDQFLGRCDPEFLRLLRILSYFRNTR
NLLIPCKMLLRRTGPSAMKTERCRNTAGYLEGFLCFCAPAAVLRWSRIGGCKVLLQSEVT
RGLTVLNKPSRAPQQLPATKVVALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGT
PMNLNLKTGRGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSD
YFNYGFNEETWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEF
KTDFLALVGGRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDH
GSKPQPPQQPQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHP
PGLPPPGPIPGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPIST
SHTPWVTTVDKGTSSSSSSHWEYSGSRRERERERERERERERDRDRTPTTSEYNNDDERY
RYYSRERSYDFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHR
RHKHKKNKRSKEEKEASEDGAQEGEEQDAKE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaagttagtggatgttatcaataaaatgcgaataaaccctggacactatagg
tcatcttctggtccagcttttcatgtacagtcctcttctaaaactcccaagtttggcttg
agcaacaagtttgatacagaatttccttctgttctgacagggaaggttgccccagaagaa
ttcaagaccagcatcagtcgtgtgaatacctgtttaagaaagaatctccctgtcaatgta
aaatggctgctctgtggctggctgtgctgctgctgcacactgggctgtagcctgtggcct
gtagtctgtcttaacaaaagaactagaagatcaattcagaagttattagaatgggaaaat
aacagactatatcataagcttggtttgcactggaagctgagtaaaaggaaatgcgaaact
agcaatatgatggaatatatgacaccactggtaagcaagaagatggaccaatttctgggt
cgttgcgatccggaatttctgagattgttacgaatactgtcctacttccgtaacacgcgg
aatcttctcatcccttgcaagatgctcctcaggagaaccggcccgtcagcaatgaagacc
gagagatgtcgcaacactgctggatatctggaaggcttcctttgcttctgtgccccagca
gcggtgctgcgctggagtcgaatcggcggctgtaaagttcttctgcaaagtgaagtgact
cggggactgactgtgctaaataagccaagccgagctcctcagcagcttcctgccacaaaa
gttgtggcccttccaagtggtgaagatgatgaagatgacagcgatagtgacagtgatgat
gatgacgtgaaagttactattggcaacattaaaacgggagcaccgtcgtacatgggaact
ccgatgaatctaaacttaaaaacaggtagaggctatggagcatctgcttcagccaagttg
cagcccaaaggtattgacttagatgccgcagggaatataaatggattgcctgttatagaa
gtggatttagattcatttgaagacaaaccgtggaggaaaccaggtgctgatctttctgat
tactttaattacggattcaatgaagaaacatggaaagcttattgtgaaaagcagcgccgg
cttcagcttggactggatcctgctcctcccatcagcactgaaaataagatcacggttcag
caaggaagaacaggaaatgcggaaaaagaagtggaaaacaacatcatcaaaacagaattc
aaaacagacttcttggctctggtgggaggacgcatgaaggctgggcctcctcctaatagg
aagctgggtgggacaattgatgtgatcggtggccaggcaggcacaattaggcgagtagaa
ggaagacgtcgtgataagcatgcctctgaggaaaaccccattcaggtccttggagaccac
ggaagtaagccacaacccccccagcagccccagcagccatcacagccccaacaaccacct
cagcaacagccgtttgcaccaccagcaggcccaccgcctcccccactggctgggccacct
ccaccacacttcctccaccctcctccaccagttacttctgttccacctcccctgcatcct
ccaggtctgccaccacccggtcctattccagggttgttcccgcctcctctggcgccgcca
ccagctctcctcattccaaccttggatggccagccagccagctacaacaataggcagcct
cctccgttcggctacaactctgcagattcaggtttcatcagctacccacccatctccaca
tcccacacgccctgggtgacgacggtggacaaaggcacaagcagttccagcagcagccat
tgggagtactccggctcgaggcgcgagagggagcgggagcgcgagcgggaaagagaaagg
gagagagaccgagaccgcactccaaccactagtgaatacaacaatgatgatgaacgatac
cgctactacagccgagagcgcagctacgacttcgagcgtgactaccgccggagtcgagat
cgcagcagggagcgagaggatcgtcaccgagagcgcaggcacagagacaaagaggagagc
agcaagcataagtcttcgaggcgcaagcaacacgagagcgaggagggggagagtcaccgg
cgccacaagcacaaaaagaacaagcgtagcaaagaggagaaggaggccagtgaagacggt
gcccaggagggagaggagcaggacgccaaggagtag
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integrated database retrieval system
