Egretta garzetta (little egret): 104126892
Help
Entry
104126892 CDS
T05152
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104126892 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104126892 (WDR33)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104126892 (WDR33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Collagen
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104126892
NCBI-ProteinID:
XP_009637799
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDTKLEEKKKT
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGAAGPQGFMGPQGP
PGPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLG
PQGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGL
NPRGMQGPPGPRDNQGPTPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTML
GPPQELRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLL
GDGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDSRGPPNHHMGPLSD
RRHDQNSGGPDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHP
DKRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSD
DRYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDTFDSPDENSRG
RDHGVRGRGRGALRGGRKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPA
NRERSSSLQGMDMASLPPRKRPWHDGPGTSDHREMDAPGGPPEDRGKGRGNSGPSQRAPK
SGRSGSLDGDHHDGFHRDEAFGGGPTGGSNPSRGGRSGSNWGRGNNMNSGQSRRGSSRGS
GRGR
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggctccccgccccgatttttccatatgccgaggttccagcaccag
gcacctcggcagctgttctacaaaagacctgattttgcacagcagcaagcaatgcaacag
cttacttttgatgggaagcggatgagaaaagctgtgaaccgaaagaccatagactacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagcctgatgcaggatattataatgatttggtccctcctataggaatgctgaac
aaccctatgaacgctgtgacaacaaagtttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggagagttcactttatggaatggactgactttcaattttgaaacgatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacacggagcagatgtgaaatgtgttgactggcatccaacaaagggattagttgta
tcaggaagtaaagacagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgcaacactacatgctcataaaaacacagtgatggaagtgaaactgaatctgaatggc
aactggctgctaacagcttctcgtgaccatctctgtaagctctttgacattcgtaatctg
aaagaagaacttcaggtcttcaggggtcacaagaaggaggccacagctgtggcctggcat
cctgttcatgaaggactgttcgccagcggaggatctgatggttctttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgagggaatgatctggagc
ctggcgtggcatcctcttggacacattctctgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgagatcgttacaacttgaatctgcta
cctgggatgtcagaggatggtgtggaatatgctccgggagatgatctggaacccaacagc
ctggctgttattcctgggatgggaatacctgaacaattgaaaatagccatggagcaagag
cagatggggaaagatgagtccaatgatattgaaatgacaatcccaggactggactgggga
atggaggaagtaatgcaaaaggaccaaaagaaggtgccacagaaaaaagtgccctatgca
aaaccaataccagcacagtttcagcaggcttggatgcagaataaagttcctttgcctccc
ccacctgagccactgaatgatagaaaggaagatactaagctggaggagaaaaagaagaca
caggcggagattgaacaggaaatggcagcacttcagtacacaaacccacagctcctggag
caattgaagattgagagacttgcacaaaagcaagctgagcaagtacagccaccacctcca
ggaggctctcttcacggaccccagccttttccagggcaaggcccaatgtcacagatgcct
caaggatttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttcagacctccgggaccccaaggacaaatgggacctcaa
ggtcctccattacaccaaggagctgcaggtccacaagggttcatgggaccacagggacct
ccaggcccccaggggcctccacaaggaatgccacggcctcaggatttacatggacatcaa
ggaatgcagagacatcctggccctcatgggccaatggggcctccaggtccacagggtaat
gctggcccacaaggccacttaggaccacagggtctacctgggtctcagactcatttagga
ccgcagggtccacctggcccacaaggtcatttgggtcctcaaggtccccctggtggtcaa
ggaatgcaagggccacctggtccccgaggaatgcaaggacctcttcctcatggcatgcaa
ggagctccaggatctcaagggatgcaggggcctatatctcaagggcctttgatgggactt
aatccaagagggatgcagggtccaccaggacccagagataaccagggacctactccacaa
gggatgatgatgggtcatccgcaagaaatgagaggtcctcatatgcaaagtggtttacta
ggacatggtccccaggagatgaggggcctccagggacccccgcctcaaggtacaatgtta
ggaccgccacaagaattgcgtgggccaccaggtccacaaggccagcagggacctccacaa
ggctctttagtagggcctcaaggaaacatgcaaggacctcagggacaaccgaacccttca
agggggccgcacccttcccagggccctctgcctttccagcagcagaaaacgcctctgttg
ggtgatgggcctcgtcccccatttaatcaggatggccagaacccaggtcctccaccactg
ataccaggactggggcagcagggaggacaaggtcgtcttggccctcacaaccaaggacct
ggtcttaataaaggtgactcccgtggtccaccaaaccatcacatgggccctctctcagat
agaaggcacgaccagaacagtggtggtcctgatcacgggcctgagagagggttgtttcga
ggtggccaggagtggggtgatggtagagacagcaggggcatgccagatagacgaggacct
cacccagatttccatgatgactttgatcgaccagatgacttccgtgatgacttccatcca
gataagagatttggccatcgattacgggaatttgaggggagaggaggcccaccattgcaa
gatgaaaagtggagacgaggtggacctgggcctccctttcctcctgatcacagggaattt
gaaggagggggttcaaaccgtgggcctcctggtgcttgggaaggacggagaccttcagat
gatagatatccacgggatcctgaggatgcacggttccgaggaagacgagatgagagcttc
agaagaggaggaccctcgagacatgagggccggggacccaggggcagagatggctttcct
ggccctgaagattttgggccagatgacacttttgactctccagatgaaaactcaagagga
agggaccatggtgttcgggggagaggtcgtggtgctcttagaggaggccggaagggttta
cttcctactccagatgaatttccacgcttcgaaggagggcggaaaccagaatcctgggat
ggaaacagagaaccaggtcctcgtccagatcaccctcctcatgatgggcactctccagct
aacagagaacgttcttcttcgctccagggcatggacatggcctcattgccaccacgtaaa
cgtccctggcatgatggaccagggacctctgaccacagggaaatggatgctccaggtgga
cctccagaggacagaggcaaaggacgaggaaattccggaccttcgcagagagcgccaaaa
tctgggaggtctggttctttagatggagaccatcatgatggattccacagggatgaagct
tttggtggaggccctacaggaggcagtaacccttctcgaggaggaaggagtggaagtaat
tggggaagaggaaataacatgaactctggtcaatcaagaagaggatcatctaggggcagt
ggaagaggccgatag
DBGET
integrated database retrieval system
