Egretta garzetta (little egret): 104126964
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Entry
104126964 CDS
T05152
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104126964 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104126964 (PARN)
Enzymes [BR:
egz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104126964 (PARN)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104126964 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
T6PP_C
NCBP3
RRM_1
Motif
Other DBs
NCBI-GeneID:
104126964
NCBI-ProteinID:
XP_035750979
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MDFLLFQFGLCTFKYDYTEEKYIMKSFNFYIFPKPFNRSSPDVKFVCQSSSIDFLANQGF
DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGSLSYISPNATKCPVTIPEDQKKFI
EKVVEQIEDLLKNEENESLELEPCTGFQRKLIYQTLSWKYPKGIHVETLESDKKERYIVI
SKVNEEERKRREQQKQAKEQEELNDAVGFSRVVHAIANSGKLVIGHNMLLDVMHTIHQFY
CPLPDGLSEFKEVTSCVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKEVPFSPPKVE
SAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPKNHVSARSKLIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTSA
FVSLSQPEQVQIAVNTSRYAESYRIQTYAEYVEKKHEEKQAKRKCTEDSWKEMERKRLKT
QCTPYISQSRYYCVNSFTGTSTVGKRIMSPIQEETGSDDMEEGEGQDPEYDQTDSCAGSL
QDGKKRAKKFKKIRTEQVPAGSLTTSSTGIFEVPETW
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggattttttgctctttcagtttggcctttgcacttttaaatatgattacacagaagaa
aagtatataatgaagtcatttaatttctatatttttccaaaaccctttaacagaagttca
ccagatgtcaagtttgtctgtcagagttcaagtatagattttttagcaaaccaaggattt
gattttaataaagtttttcgcaatggaattccatatttaaatcaggaggaagaaagacag
ttaagggaacaatatgatgaaaaacgttctcaggccaatggtgcaggatctctgtcgtac
atttctcctaatgccacaaagtgtcctgtaacaattcctgaagatcagaaaaaattcatt
gagaaagtagtggagcagatagaagacttattaaagaatgaagaaaatgaaagtttggaa
ctggagccatgtacaggatttcagaggaaattaatttatcagaccttgagctggaagtat
ccaaaaggtatccatgttgaaactctagagtcagataagaaggagagatatattgttatt
agtaaggtaaatgaagaagaacgaaaaagaagagaacaacagaaacaagcaaaagaacag
gaagaattgaatgatgcagtaggattttccagagtcgttcatgccattgctaattctggc
aagcttgttattgggcacaatatgctactggatgttatgcataccatacaccagttctat
tgtcccctacctgatggcctaagtgagttcaaggaagtaacatcatgtgtctttccccgg
ctattggatactaagctgatggcgagtacgcaaccttttaaggagatcattaataataca
tcccttgcagaactggagaagcgtttaaaagaggttccattcagccctcctaaagttgaa
agtgcagaagggtttccaagttatgacacagcttctgaacagcttcatgaagcaggatat
gatgcgtacattactggactgtgcttcatctccatggctaatttcctaggttcattcctc
agtcctccaaaaaaccatgtgtctgctagatcaaaactcattgaacctttttttaacaag
ctatttcttatgagagtaatggacataccatatctcaatttggaaggaccagacttgcag
ccaaaacgggatcatgttcttcatgttacttttcccaaagagtggaagactagtgacctt
taccagcttttcagtgcctttggtaacattcaggtttcatggattgatgatacctcagca
tttgtatcattgagccagccagagcaagtacaaatagctgtaaacaccagcaggtatgct
gaaagttataggatccagacatatgcagaatatgttgagaaaaaacatgaagaaaaacag
gcaaagagaaaatgtacagaagatagttggaaggagatggagagaaagcggttaaaaact
cagtgcacaccttacatttcccagagtcgatactactgtgttaacagttttacaggtacc
agtacagtgggaaagagaatcatgagtcctattcaggaagaaactggttctgatgatatg
gaagagggagaaggccaagatccagaatatgatcagacagactcctgtgcaggatccctt
caagatggtaagaagagagccaaaaagttcaaaaagatcaggacagaacaagttccagca
ggaagcctcacaactagttccactggaatttttgaagtccctgaaacatggtag
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integrated database retrieval system
