Egretta garzetta (little egret): 104127401
Help
Entry
104127401 CDS
T05152
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04510
Focal adhesion
egz04512
ECM-receptor interaction
egz04518
Integrin signaling
egz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104127401 (COL9A1)
04518 Integrin signaling
104127401 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104127401 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104127401 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
egz00535
]
104127401 (COL9A1)
Proteoglycans [BR:
egz00535
]
Extracellular matrix (ECM) proteoglycans
Others
104127401 (COL9A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
104127401
NCBI-ProteinID:
XP_009638366
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MKRNWKITAFFYVCSFLWSFISATIQQQSRLPVILGASRRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASQGIIQRVAGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGQMKSVEFSYKGVDGSLQTASFLHLPFLFDSQW
HKLMISVEANSVTLFIDCIKIESLNIKPKGKISTDGFAVLGKLKNNPEISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDAGKPGSPGLPGESLRGNGLAMSENRVTFALTLYTLLPKGFTGPDGSRGATGPK
GQKGEPGLPGARGLPGKGLLGPPGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRG
TIGLQDGDPLCPNACPPGRPGHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVG
AQGPPGILGVRGITGIMGPKGTKGARGLDGDPGPQGLPGAPGDQGQRGPLGEAGPKGERG
PQGTRGINGLPGPKGESGLPGVDGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPG
VKGVPGPKGNRGPPGVPGLMGNSGKQGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPG
KWGPQGDIGLPGLPGPPGLPGGKGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPG
AKGAVGNPGDPGSRGPEGSRGLPGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQ
HIKQVCMRVMQEQLAQLAASLRRPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPG
LKGPPGEIGRKGPKGEPGERGERGFPGRGLKGYPGPRGLPGEPGKPSYGREGRDGERGLP
GVAGQPGVPGPPGPPGPPGYCEPSSCRVQAGQRAGKNMKGP
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaactggaaaattacagctttcttttacgtgtgtagttttctgtggtctttc
atctcagccaccatccagcaacaatcaagactaccagtcattctgggtgccagtcggaga
accgatctctgcccaacaatcaggattggccaagatgacttaccaggctttgacctgatt
tctcagttccagatagaaaaagctgcttcccaaggaattatccagagagtagcaggctcc
acttctctacaagtggcttataaattgggacccaatgtagacttcaggatcccaaccagt
gccatatattccaacggattgcccgatgaatattcctttttaactacttttcggatgact
ggggccacacttcagaaatactggactatttggcagattcaggattcttcgggaaaagaa
caagttggagtgaaccttaatggccaaatgaaaagcgttgagttttcttataaaggagtg
gatggaagtcttcaaactgcatcatttttgcatttgcctttcttgtttgactcccagtgg
cacaaacttatgataagtgtggaagcaaacagtgtcacactttttattgactgtattaaa
atagaatccttaaacataaaaccaaaagggaaaatcagcactgatggctttgctgtgctt
ggaaaacttaaaaataatcctgaaatttcagttccgttcgaaatccagtggatggtgatt
cactgcgaccccctgcgaccccagcgcgaaggctgcggcgagctgccggcccggataagc
cagacggtaatcgagagaggtctccccggtccaccaggccccccaggtccgccagggcca
ccaggagttcccggcattgatggcattgatggggagagaggtccgaacggccccccgggt
cctccgggcccagatggggatgcagggaaaccaggatcccctggcctgcctggagaatct
ctaagaggaaatgggcttgccatgagtgaaaaccgtgtgacctttgcattaacattgtat
acattgcttccaaagggattcacaggacctgacggctcacgtggagccacaggaccaaaa
ggacagaagggtgagccaggactgccaggtgctcgtggacttccaggcaaggggcttctt
ggaccacctggtccagccggtgcagcaggacttcctggggaagtaggtcgtgctggtcca
cctggagatccaggaaaaagagggccaccagggccaccgggacccccaggccctcgggga
acaatcggcctgcaagatggtgatccattgtgtcccaatgcttgtccgcctggccgccca
ggacacgctggcttaatgggaatgaagggacagaaaggttcaaaaggagagtctggtgaa
ccaggaaaacaaggttataagggtgaagaaggggaccaaggacccagtggtgaagtggga
gctcaaggccctccaggcatcctaggtgtcagaggtataactggtatcatgggacctaaa
ggtaccaaaggagctcgtggacttgatggtgatcctggtccccaaggtcttcctggtgca
cctggggatcaaggacagagaggtccactgggagaggcaggtccgaagggagaaaggggc
cctcaaggtacaagagggataaatggtctccctgggcctaaaggagagtctggcttgcca
ggagttgatggccgggaagggatccctggaatgcctggagcaaaaggtgaaccaggaaaa
cccggagctccaggtgatgcagggcttcagggtctgccaggtttaccaggctctccaggt
gtgaaaggcgttcctggcccaaagggtaatagaggtccccctggggtgccaggtttgatg
ggaaattctggtaaacagggtgaacaggggccagagggagaagcaggtccaacaggaccc
cggggaccaccaggtagcagaggggagccaggtcctgcgggtcctccaggtttaccaggg
aaatggggtccccagggtgatattggacttcctggactgccaggtcctccaggcctgcct
ggtggtaagggtgaccggggttcagtgggtgaaccaggacctaagggtgaacaaggtgca
cctggagcagaaggagacggaggagaaaagggtgacttgggtgatatgggattaccagga
gcaaagggagctgttggtaatcctggagaccctggttcccgtgggcctgagggaagtcgg
ggactgcctggcatggaagggccacgaggctcacctggaccacgaggcttgcagggtgaa
cagggtgccccaggtctgcctggcagccaaggtccagctggaaaagaaccaactgatcag
cacattaagcaggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagt
cttaggaggccagaatttggtgctccaggtcttcctggccgaccagggccaccaggtgct
ccagggcctgctggcgaaaatggcttcccaggacagcttggaccacgtggcttgcctggc
cttaaaggtccccctggtgagatcggtcgtaaaggtcctaaaggtgaaccaggagaaaga
ggagaaagaggatttccaggcagaggactgaaaggttaccctggaccaagaggtcttcca
ggtgaaccaggcaaacccagctatggcagggaaggccgtgatggtgaacgagggctccct
ggagtggctggtcagcctggggttcctggtcctcctggccctcccggccctcccgggtac
tgcgagccgtcgtcttgccgagtgcaggctggacagagagctggtaagaacatgaaaggg
ccatga
DBGET
integrated database retrieval system
