Egretta garzetta (little egret): 104127534
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Entry
104127534 CDS
T05152
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104127534 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egz03032
]
104127534 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
egz03400
]
104127534 (TOPBP1)
DNA replication proteins [BR:
egz03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104127534 (TOPBP1)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104127534 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
BRCT_TopB1_SLF1
INPP5B_PH
Motif
Other DBs
NCBI-GeneID:
104127534
NCBI-ProteinID:
XP_035751589
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MMGGRVYRDLNVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKMLWDKSQQSIMRYTDV
NMEDYACPVFLGCTICVTGLSNSDRKEVQRLTAEHGGQYTGHLKMNECTHLIVQEPEGQK
YECAKKWNVHCVSVQWFSDSIEKGFCQDETIYKIEAGSKLSNTPSTSTPTNHASKPNNHT
LSDVSHISNINLSGVNETACSSAMSSRLDPLPDELENLDISSFQAPEDLLDGCRIYLCGF
SGRKLDKMRRLINCSGGVRFNQLNEDVTHVILGENSNELKHFLEKTAHRPHVVTAKWLLE
SFSKGYLHPVEQYIPLNYQLLEKPILEQPGMKSILPKNNSLLKKEAVNVIKHQKAAEDDF
LSLYVNNDSTSDEVEKLMPRTFSDVTHLTVEGENPSSVCNGSLGESSAPVEGGLFVRKRF
LLLGFGEEEESCIADIVKENAGKILQLQSRTIADYAVVPLLGCTVTPTVGDVVTNTWLIT
CVEQQLLLDPQSNPLFTPVPVMEGVTPLEDCVLSFSQFTGAERDSLVYLAGLLGARVQEF
FVRKANAKKGMFASTHLVVREPDGSKYEAAKKWNLPAVTVAWLLQSARTGKRADESKFLV
ENAEAEDKESSITQLSKTPATVKSPDSEQPTYLLEAGKKTAVTPLDINRFQSKAFQAVIS
HHIGKKTTPLAQGGVPQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETPGGPDQKI
RKPSTPLSEVIGRNLKLALANSTRHTVALTASPQLTTAQPEAMLEQEEEPKPLADVVIYV
SKKLSKKQSELNAVAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKSVKERGIHIVSEH
WLLESAQEYKRLPESLFPHTYNPKMSLDISTMQDVRLSSSSKLPSTGKPAEENEIIPVDE
DDAEDDVTTDEIKEIVTAEEQIVTSESKGVLTQALEMRENFQRQLQEIMSATSLVKPQGQ
RGSLSRNSFDGSPTTPDSTRSVRNGRSRVLEALRQSRQALTDINTEPSQSEQIVWDDPTA
REERARLVSNFQWPNSPSQCTEQGQSNVNKNTDESAFKGSLADAEIAAVPDAGDGDLIEG
LKNPVCRDPETPIKDHLIPTPQAPSIAFPLANPPVAPQPKEKAVTEDEKADEEPEKTRKF
QLSSLNPQERFDYCHLIEELGGVVLEKQCFDPSCTHIVVGHPLRNEKFLASMAAGKWVLH
RSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKKIHKGRQETGI
AEGAFSGWKVILNVDQTKEPGFRRLLQSGGAKVFPGRSVSVFKEATHLFADFSKLKPDDT
RVNVAEAAAQGVNCLKPEYIADYLIQDPPPPMESYCLPEAESYLQNTTEFGTAVSQKRKA
LGEMSRVKRSRIH
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtggacgtgtgtacagagacctcaatgtgtcagtaactcaccttatagctgga
gaagttggcagcaagaaatacttagtagctgcttctctgaaaaaacctattttgcttccc
tcttgggttaagatgctgtgggataagtctcagcaaagcataatgagatacactgatgtt
aacatggaagactacgcttgtcctgtgttccttggctgcacaatttgtgtgactggctta
agtaattcagacaggaaagaagtccaacgccttactgctgaacatggtgggcaatataca
gggcacctcaagatgaatgaatgtactcacctcatagttcaagagccagaaggtcagaag
tatgaatgtgccaaaaaatggaatgtgcactgtgtatctgtgcagtggttttctgacagt
attgagaaaggcttctgtcaggatgagacaatatataaaatagaggctggatcaaaactg
agcaatacacccagtacgtcaacacctacgaatcatgccagcaagcccaataatcatacc
ctttcggacgtcagccacatttccaatatcaatttgagtggtgttaatgaaaccgcatgt
agttctgctatgagcagcagactggatcctcttcctgatgagctggaaaacttggatata
agttcttttcaagcccctgaagacttgctagatgggtgtcgaatctatctgtgtggcttc
agtggcaggaagttggacaagatgagaaggcttattaattgcagtggtggtgttcgattt
aatcaacttaatgaagatgttacccatgtcattttgggggaaaatagcaatgagttgaaa
cacttcttggaaaagacagctcacaggcctcatgtagtgacagcaaaatggttgctggag
tcatttagtaaaggttacctacatccagtggagcaatatatccctctaaactaccagctg
ttagagaaaccaattttggagcaacctggaatgaagtcaattcttcccaaaaataacagt
ctcttgaagaaagaagctgtgaacgttataaagcaccagaaagctgctgaagatgacttc
ctctctctatatgtaaataatgattctacatcagatgaagttgaaaaactaatgcccaga
accttcagtgatgttactcacttgactgttgaaggagaaaatccatcttctgtctgtaat
ggttctttgggagagtcttctgcaccagttgaaggaggcttatttgtcagaaagagattt
cttcttttgggttttggtgaagaagaggagtcctgcattgcagatattgtaaaggagaat
gctgggaaaattctgcagctgcaaagcagaaccattgcagactatgctgtggtacctttg
ttagggtgcacagtgacgccgactgttggtgatgttgtcacaaatacctggctgataaca
tgtgtggaacagcagctccttttagatccccagtccaatccacttttcacaccagtcccg
gtaatggaaggagttacgcctctggaagattgtgttctttcttttagccagttcactggt
gcagagagagactctctggtttatctggcaggactgctaggagcaagagtccaagaattc
tttgtgcggaaagccaatgcaaaaaagggaatgtttgccagtacccaccttgtggtgaga
gaaccagatggttccaagtatgaagctgcgaagaagtggaatttgccggcagtcactgtt
gcttggcttttgcagtctgcaaggacaggaaagagagcagatgaaagcaagttcttggtt
gaaaacgcagaggctgaagataaggagagttccattactcagcttagcaagacaccagca
actgttaaatctcctgattcagaacaacctacttacctccttgaagctggaaaaaaaaca
gctgtgacccctcttgatatcaacaggttccagagtaaagctttccaggctgtaatttct
catcatattgggaagaagacaacccctcttgcccaagggggggtgccacagaaagaaccg
tctttacatcttgatacaccatcaaaatttctttccaaagacaagttgttcaagccttct
tttgatgtaaaggatgctctggcagctttggaaactcctggaggtcctgatcaaaaaatc
aggaaaccaagcacacctctctctgaagtcatcggcagaaacttgaaattggcactggca
aacagcacaaggcatacagtagctcttactgccagccctcagttgaccactgcacagcca
gaagcgatgcttgaacaggaagaagagccgaagcctctagctgacgttgttatatatgtt
agtaaaaaacttagtaagaagcaaagtgaactgaacgcagtagcagcttctcttggggca
gactacagatggtgctttgatgaaacagtaacacacttcatctacaagggaggacaaaat
gacaacaataaggagtacaaatctgttaaagaacggggtatacatattgtttcagaacac
tggcttttagagagtgcccaagaatataaacggcttcctgaatctctctttcctcacact
tacaatcccaaaatgagcctggacatcagcacaatgcaggatgtcaggctctcctcctcc
agtaaacttccatcaactggaaaaccagcagaggaaaatgagattattccagtggatgaa
gatgatgctgaagatgatgtaactactgatgaaataaaggaaatagtcactgcagaagaa
caaattgtaacaagtgaatccaaaggagttttaacccaagcactagaaatgagggagaac
ttccaaaggcagctgcaggagatcatgtctgccacatcgctagtgaaaccacaagggcaa
agaggttctctttcaaggaacagttttgatggttctccaaccactcctgatagcacacgg
tctgtgcgaaatggccgcagtagagttttggaagccctaaggcaatcccgtcaggcactc
acagatataaacacagagccatcccagagtgagcagattgtctgggacgatcctactgca
agggaggagagagcaagacttgtcagtaacttccagtggcctaatagtccttcccagtgc
actgagcaaggtcagagtaacgtcaataagaacacggatgagtctgccttcaaaggatct
ctagctgatgcagagattgctgctgttcctgatgctggggatggagatttgatcgagggt
ctgaaaaatcctgtatgtagagatcctgaaacaccgattaaagatcacttgatccccact
ccgcaggctcccagtattgctttcccactggctaaccctcctgtggcaccacagcccaaa
gaaaaggctgttacagaagatgagaaggctgatgaagaaccagaaaaaacccgtaaattt
cagctgtcttctcttaatcctcaagaaagatttgattactgccatctgattgaggaatta
ggtggagtagtacttgagaaacagtgctttgatccaagttgcacacacattgttgtggga
catcctcttcgaaatgaaaaattcttggcttcgatggcagctggaaagtgggtgcttcat
cgttcctacctggaggcatgtagaggagccggctgctttgttcaggaagaagattatgag
tggggaagtaattccatacttaatgttttgcctggaatcaatgtaaaccagaagaaacta
gcactcgcagccatgagatggaggaaaaaaattcataaagggaggcaagaaactggtatt
gccgagggagctttcagtggctggaaagtgatcctgaatgttgaccaaaccaaggaacca
ggattcaggcgccttcttcagtcaggaggagcaaaagtctttcctggtcgttctgtgtct
gtgtttaaagaagcaactcatctctttgctgacttcagtaagctgaagccggacgacacc
agggttaacgtagcagaggcggcagcccaaggagtgaactgcctgaaaccagagtacatc
gctgactacctcatccaggatccacctcccccaatggagtcttactgcctgccagaagct
gaatcttaccttcagaatacaacagaatttggaactgcagtgtcccagaaaagaaaagcg
ctgggagaaatgagcagagtcaagcgatccagaatacactga
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integrated database retrieval system
