Egretta garzetta (little egret): 104127539
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Entry
104127539 CDS
T05152
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04140
Autophagy - animal
egz04148
Efferocytosis
egz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104127539 (VPS18)
04148 Efferocytosis
104127539 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104127539 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egz04131
]
104127539 (VPS18)
Membrane trafficking [BR:
egz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104127539 (VPS18)
Hops complex
104127539 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
104127539
NCBI-ProteinID:
XP_009638511
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MYCGVVVVGFCLVFVLSVHNLSPGYVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQL
CMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSECLYLNRS
VQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGSLFSTNPD
QYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTEQQGFSSI
FAMHADHLPSFREFPASFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYSRPDSILS
DERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFLEKFGLLT
RMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLA
KEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQ
TTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNRASIYELL
ASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIP
KKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLQETQQAIHNYL
LSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVMELYEEAV
DLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSCALLKIED
VLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSV
EPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLAATSQ
PSKSHHRPKDADSISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYE
EEMQSWL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtggggtggtggttgtggggttttgtcttgtttttgttttaagtgtgcacaat
ctttctccaggatatgtgaatgcacgactggagaaggaaacaccaatatttaacaagcaa
aggattgattttgctcctccagagaagattaacagcttagtggtctcctctaaccagctc
tgtatgagccttggcaaagacacccttctcaggattgatcttgggaagccagatgaacct
aatcaggtagagctgggacgcaaagatgaagccaaagtttacaagatgtttttggaccac
acaggctctcatctcctgatcgctctgaacaccagtgaatgcctttacctgaatagaagc
gttcagaaagtgcgagcactctcccgctggaaaggccacttgattgaaagtgtgggctgg
aacaaatttcttggttcggagaccaacactggacctatcctggtggggacagcccagggg
cagatctatgaggctgaaatctctgtcagtgaaggaagcctcttcagcactaatcccgac
cagtacttccgacaggtctacactctggaggaggaatcgggacctgccccagtctgctgc
ttggagattgaacgagggatagaagggaaattttttattatagccaccactcgaaagaga
ctcttccagtttgttggcaaagtgcctgaagggacagagcagcaaggcttcagctccata
tttgctatgcatgctgaccatttgcccagcttccgggagtttccggccagctttggtttc
agcgagatagccttttacaccccaaaactgcgctccaacccacgctcctttgcctggatg
atgggaaatggtgttttatatggtaccttggattacagccgtcctgattcaattttgagc
gatgaacgggtctgggtttatccttcggatattgacataactgtaaacaagccaatatcc
attgtacttacccagttccacttcctgttgctgctgcctgaccgggtgaaggctgtatgc
actttgaatgggcaggttgtttttcaagatctgttcctggagaagtttggcttactgaca
cgcatgatcaaagatcccacagtccagcagatatggatccacactgagaaagtagtgttt
cgctaccacgtccagcgggaatctagagatgtgtggaagatgtatatgaatatgaacaaa
tttgatttagccaaagagtattgtaaagaccgtccagagtgcctagatattgtgctggca
aaagaggcagagcactgcttccaaaacaagaggtatctagacagtgccaaatgttatgca
ctcacccagaactactttgaggaaattgcccttaagttcattgaagccaagcaagaagag
gccctgatggagtttctgattaagaagctaagtaacctaaagccttctgagaagacacag
acaactttgctgaccacgtggttaacagagctgtacctgaactggctaggtatattggaa
ggagatccctcacagcgaaatctctatttggatacacgggaaaagtttcgcactttcctg
agcagtcctaaaaacaaagactgtctatttaataaccgggcatctatttatgagctgttg
gcaagccatggggacacagagcacatggtctactttgcagtcatcatgcaggactatgag
cgtgtagtagctcaccactgccagcatgatgagtacgatgaagctctaaatgtgctgtcc
aggcacagagatgagaagctgttctacaagttctctccggtcctcatccagcatattccc
aagaaggtagttgatgcttggatttctatgggctctagactggatgccaggaacctcatt
ccagcccttgttaactacagccagagtgccagcacccagcagatcaatgaagccattaga
tatatggagttctgtgtctatcagttgcaggaaacccagcaagccattcacaactacctg
ttgtctctttatgctttgtgtcggccggactcgctgctgtcatacctggagcaagcagga
accaacccaaacaggatccactatgacctgaagtatgcattgcgcctgtgtgcagagcac
gggcaccaccatgcatgcgtccatatttacaaagtgatggaattatatgaggaggctgtg
gatctcgccttacaggtggatgttgatcttgccaagtcctgtgcagatctccctgaagat
gatgaggaactccggaagaagctctggttgaagattgctcgccatgttgttcaggaagag
aaggatgtcaagaaggcaatggcctgcctctccagctgtgccctgctgaagattgaagat
gtcctgccattctttccagactttgtcactattgaccatttcaaggaggcaatctgtaac
tccctggaggactacaacaagcacattgaggagctgaaaagggagatggaggaagccaca
cagagcgccaagagaatccgagaggacatccaggaaatgagaaataagtatggctctgtg
gagcctcaggaaaaatgtgctgcttgtgactttccacttctaaaccgccctttttacctt
ttcctgtgtggtcacatgtttcactatgactgtctcctccaagcagttttcccaaacctt
cctgcctataagcaggcaaaacttgaagatcttcagaagaagctggcagctaccagtcag
ccttccaagagccaccaccgtcccaaggatgcagatagcattagcttggggaaaggtcag
cagagccgggaacagatcaaagctgacattgatgacattgtggcagctgaatgtgtgtat
tgtggtgagctgatgatccggtccattgacaagccttttattgatccccaaaagtatgaa
gaagaaatgcaaagctggctgtag
DBGET
integrated database retrieval system
