Egretta garzetta (little egret): 104128219
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Entry
104128219 CDS
T05152
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egz03021
]
104128219 (SCAF4)
03041 Spliceosome [BR:
egz03041
]
104128219 (SCAF4)
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104128219 (SCAF4)
Spliceosome [BR:
egz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104128219 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104128219
NCBI-ProteinID:
XP_009639260
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
QSEADSIPTFQLVLVLKIDRAQSCCLFRTLKLFSLMEMKPPISRAKMILITKAAIKAIKL
YKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYL
YLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSATAPMTENATNNEGSPPPPA
KVPSDPPQVTANSVPTVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVID
NTVMAQVQAITAQLKTTAAQPPEQKAAFPPPEQKTSFDKKLLDRFDYDDEPEAVEDSKKE
DSAPSPSVSQPALTSLSFSAQAGWCSISGGFPGEGMQQPVFPQLPNMDPFQQRMMGIQQD
PMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPPTAPVQQTFQSPFPVQSESHMQKPHQ
QDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRR
HSPKSRSQERRERERERERRSKGLPQIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEF
GPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQ
YWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSPEWKGIPKKSENEVAQNGGAEAAH
NEPVSPIPKALPVPIPVPLPAPITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFA
PGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGVNEDT
TKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVPPPVAPTNVPAPVTQTIPLLGTQGVAP
PPPAPVVGLQTPSTGLLGARPGLIPLQRPPGMPPPPLQRFPLMPPRHMPPHMMHRGPPPG
PGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGGPGGPEDNRDGRQFRNDRQTFTPNRDQE
RFGRRSFGNRVENDRERYGNRNDDRDHERAGNRERRDWGRRSPERDRHRDLEDRNRRSSG
HRDRERDSRDRESRRDKEETRGKEKPEMTDRADGDKNHESHSGKMEDADIVSELAAGESE
PAGVKPVEELTPEATSSAEQAEKDLGSVAEAPR
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
caaagtgaagctgatagtattcctacatttcaacttgttcttgttctgaagatagaccgt
gcccagtcatgctgtctttttaggactcttaagcttttttcactgatggagatgaaacct
cctatttcccgagcaaaaatgattctcatcacaaaagctgccattaaagctattaagctc
tacaagcatgttgtccagattgtggagaagttcatcaaaaagtgcaaaccggaatataaa
gtccctggattgtacgttattgactctattgttcgtcagtctcgtcaccagtttggaaca
gacaaagatgtttttgggccaagattctctaaaaatattactgccacattccagtatttg
tatctctgtccatctgaagacaagagtaaaatagtccgtgtcctcaacctttggcagaaa
aatggagtatttaaaattgaaataattcaacctcttctggatatggcagcaggaactagt
gccactgcaccaatgacagaaaatgctactaataatgaaggttcgccgccccctccagca
aaggttccttcggacccccctcaagttactgctaactcagtacctactgtgccacagttg
cccagttctgatgcctttgcagctgtagctcagttgtttcaaacaacgcaaggacaacag
cttcagcaaattcttcagacttttcagcagcctcaaaaaccccagtcacccgtcatagat
aacactgtgatggctcaggttcaagctattactgcgcagctgaaaactacagcagcacaa
ccaccagaacagaaagctgctttcccaccacctgagcaaaaaacatcatttgacaaaaag
ctgctagatcgttttgactatgatgatgaaccagaagcagtggaagattcgaagaaagaa
gattcagctccttctccttcagtttctcagccagctttgacctctctctcattcagtgca
caggctggatggtgctcaatatctggtggatttccaggagaaggtatgcaacagccagta
tttcctcaactcccaaatatggatccttttcagcagcgaatgatgggaatacaacaggat
ccaatgcgtcaccaggttccgcttcctcctaatgggcaaatgccaggttttggtcttctg
cctaccccgcagtttccacctatggcccagcctgtgattccaccaacagcacctgtgcag
caaacttttcagtctccttttccagtacagagtgaatcacacatgcaaaaaccacatcag
caggatatggaagtggaacagccacccattcaggagggaaaacggcatgtttctgacaac
agaaagtcaagatctagatctgcatcaaggtcacctaaaaggagacgttcaagatctggc
tcccgatctcgaaggtcccgtcatcgtcgatctcgatctcggtccagagatagacgccga
cactctcctaagtctcggtcacaagaaagacgtgaacgtgagagggagagagaacgcagg
tcaaaaggccttcctcagatcaagtcagaaactgttagtgtttgtagtactacgctttgg
gtaggacaacttgacaaaaggacaactcagcaagatgttggaagtcttttggaggagttt
ggcccaattgaatcaataaatatgataccgcctagaggatgtgcctatattgtaatggtt
cacagacaagatgcttaccgtgccctacaaaaactgagccgaggaaacttcaaagtcaat
cagaaatctataaagattgcatgggctttgaataaaggaataaagccagattacaagcag
tattgggatgtagaattaggtgttacttacataccatgggacaaagtgaaacctgaagat
cttgaaagtttctgtgaaggaggaatgttggacaatgaaactcttagtccagagtggaag
gggattcccaagaagtctgaaaatgaagtagctcaaaatggaggtgcagaagctgcacat
aatgaaccagtgtcacctatacctaaagctttacctgttccaattcccgttcccctgcct
gcaccaataacggtacctcctccacaggttccaccacatccatcaggtcctcctgtggtt
ggtgcactccaaccacctgctttcacagcacctttaggaatcccacctcctggatttgct
cccggagtgccaccaccgccaccacctccatttttacgacctggtttcaacccaatgcat
ttacccccaggctttcttcctcctggaccaccaccacctataactcctccagtatctgtt
cctcacactccggcagtaaacatcccaaattccacagcaactggtgtaaatgaagacact
acaaaagattcatctgtaggaaatcccatcccaacagtggtttctggatccagagggaat
gctgaaactaccgatagttccaaaatatatgggactgttccacctcctgtagcacctact
aatgtacctgctcctgtcacccaaactattccacttcttggcacccaaggagttgcgccg
cccccgccagcccccgttgttgggttgcagactccatccaccggcctcctaggcgcccgg
cctggtttgataccgctccagcgaccgccgggaatgccaccgcctccgctgcagcggttt
cccttgatgccaccgcgacacatgcctccccacatgatgcacagagggcccccgccgggg
ccagggggctttgggatgcctcccccccacggaatgaaaacccccttcccgccgccgggt
cactttgtgaggcccggggggatgccgggaagcggggggccaggcggacccgaggataac
agagatgggaggcagttcaggaatgacaggcagacgttcacgcctaacagagaccaggaa
aggtttggaaggagatcttttggaaaccgggtagaaaacgatcgcgagcgctatggtaac
cgcaacgacgacagagatcacgagcgcgctggtaatcgtgagaggcgagactggggacga
agaagccccgagcgtgacaggcacagagacttggaggacaggaacaggcggtccagtggc
catcgagaccgagagagagattcgagggacagggagtctcgcagagacaaggaagaaact
cgaggcaaggaaaagccggagatgacagacagggcagatggcgacaaaaaccacgagtct
catagcggcaaaatggaagacgcagacattgtttcagaacttgctgcgggagagtctgaa
cctgcgggtgtaaaacccgtcgaagagttaacacccgaggctacctcatctgcggaacag
gcggaaaaggatctgggctcagtggcggaggctcctcgctag
DBGET
integrated database retrieval system
