Egretta garzetta (little egret): 104128496
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Entry
104128496 CDS
T05152
Symbol
RFC1
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03030
DNA replication
egz03410
Base excision repair
egz03420
Nucleotide excision repair
egz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104128496 (RFC1)
03410 Base excision repair
104128496 (RFC1)
03420 Nucleotide excision repair
104128496 (RFC1)
03430 Mismatch repair
104128496 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egz03032
]
104128496 (RFC1)
03400 DNA repair and recombination proteins [BR:
egz03400
]
104128496 (RFC1)
DNA replication proteins [BR:
egz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104128496 (RFC1)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104128496 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
AAA_14
AAA_5
BRCT_2
AAA_16
AAA_30
RuvB_N
AAA_17
RNA_helicase
AAA_33
AAA_18
nSTAND3
AAA_7
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
104128496
NCBI-ProteinID:
XP_035752624
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MTPVVFEDTNTHDILEGNLTVTLDIRKFFGVVPPGKRQEHDTVKKSEKIKNGEGPSSGKK
KGKESKVNNSPSEDASKQKRTNKKRRIIYDSDSEEEVQSVKKSKKPSEKKAATSDLGKVL
KRDPVVYISETDEEDDFVNKRISLKPKENGTSAIGCPGTTTVKKEDIKPRAKSKPLSPVK
QTPTSALDYFGTSGVQRSEKKLVASKRKEPSQSRDSTLDDEAIARQLQIEEDSELERQLH
EDEEFAKTLAMLDETPQKKKARKDSGGEQAVLSIKSSPNVTERHKQSEGVKATNSTSEAK
NYTAKQQTKSEHSKGSHLSPQSSDGKIARELTGKTLPLKPSSKLVSLKQKEEAAEKERNH
QSLVXSESVSPEDSEKKRINYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVL
ECIERDDAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASTLGTKVINEDGLFDL
IRTMPGKKSKYELAAETEAKKVESRPKRTPQKAETGKRNFSPFKREADNKKYKSTPEKGD
TVKSAKKETTAVRKLMDFKRQTVEKKEVPKPKGNLVSEINEDGTEKLLWVDKYKPVSLKA
IIGQQGEQSCANKLLRWLRNWHKNTSEDGQAKANKTGGKDDGSGFKAALLSGPPGVGKTT
TASLVCKELGYSYVELNASDTRSKTSLKEVVAESLNNTSIKDFCAGTSSSVSGKHVLIMD
EVDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKMRSLVHYCFDLRFQRPRLEQI
KGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKMDGSRA
KKDIKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGN
LKKHLVLLSRAADSICDGDIVDRQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFP
SWLGKFSSTGKHDRIIQELAMHMSLRTQTCKRTVNMEYLSYLRDALVQPLQDFGADGVQT
AITFMDSYCLMKEDIENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLSSV
KTSKRQSGSAVTLELTEDLNVEEIQSDEDEQDTVESDAMIKQKKAKSSKMSKKEKSEETT
KKEGKRKEKTRH
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgtggtttttgaggacacaaacacacacgacatcctggaaggaaacttaaca
gttacattggatatccggaaattctttggtgttgtacctcctggaaagcgacaagaacat
gatactgtgaaaaagagtgaaaaaattaaaaatggtgaaggaccttcaagtgggaagaaa
aagggaaaggagtctaaggtgaataattcacccagtgaagatgcttccaaacaaaagcgg
acaaacaagaagagaagaataatctatgattcagattcagaagaggaggtgcagtcagtg
aaaaaatccaagaagccatctgagaaaaaagcagctacttcagatcttggtaaagttcta
aagcgggatcctgttgtttatatttcagagacagatgaagaagatgactttgtcaataaa
agaatttccctgaaaccaaaggagaatgggacgtcagcaattggttgtccaggaacaact
acagtgaaaaaggaagatataaaaccacgagctaaaagcaaaccattatctccagtgaaa
cagactcccacctcagcacttgattactttgggacaagtggtgttcaacgatcagaaaag
aaactggtagcaagtaaaaggaaagaaccttcgcaaagcagggacagcacactagatgat
gaggccattgctaggcaactgcagattgaagaagattcagagctggagagacagctgcat
gaagatgaagaatttgctaaaactttggccatgttggatgagacgccgcagaagaaaaag
gctcggaaagattcaggaggagaacaagcagtactgagcatcaagagcagtcctaatgtg
acagaaagacataagcagtcggaaggagtgaaagcaacaaactcgacaagcgaagcgaag
aattacactgctaagcagcaaactaaatctgaacattcaaaaggctctcatttatcccca
caatcatctgatggtaaaatagcgagagagttgacagggaagaccttgcctttgaaacct
agctctaagcttgtgtctctgaaacaaaaagaagaggctgctgaaaaggaaagaaatcat
caaagtttagtatagtctgagtctgtaagtcctgaggattctgaaaagaagcgaatcaat
taccaagcctaccgaagcttccttaatcgtgagggtccgaaagcgctgggttccaaagag
ataccacagggggctgaaaactgcttggaaggcctgacattcgtaattacaggcgttctg
gaatgcattgaaagagatgatgccaagtctctgattgaacgctatggaggaaaagtaact
ggcaatgtcagcaagaagacaaactatctggttatggggcgagactgtggccaatctaaa
tgtgaaaaggcatcaactttagggacaaaagttattaatgaggatggcctgtttgatctt
attcgaactatgccaggcaaaaagtccaaatatgagctggcagctgaaacagaggcaaag
aaagtggagtcaagacctaaaaggacaccacagaaagctgaaactggaaaaaggaatttt
agccccttcaaaagggaagctgataataaaaaatacaagtctactcctgaaaaaggagat
actgtcaaatctgccaagaaagaaaccactgcagttcgaaagcttatggacttcaaacgg
cagactgtagagaagaaagaagtcccaaaacctaaggggaacttggtttctgagattaat
gaagatggaacagagaagttgctatgggtagataaatacaagcctgtgtctcttaaggca
ataattggacagcagggtgagcaaagctgtgccaataaactgctccgatggctccgaaat
tggcacaagaatacctcagaagatggacaagcaaaggccaataaaaccggaggcaaagat
gatggtagtggttttaaagcagcattactttctggtccacctggagttggtaaaactact
acagcttctttggtttgtaaggaactggggtatagctatgtggagctgaatgccagtgac
actcgcagtaagaccagtctaaaggaagtagttgctgaatcacttaacaacaccagtatc
aaagacttctgtgctggcacatcctcatcagttagcgggaaacatgtattgatcatggat
gaagtggatggtatggcaggcaatgaagacagaggagggattcaggagttgattggtttg
atcagacacacaaagatacccatcatctgtatgtgtaatgatcgcaaccatcctaaaatg
cgttcgttggtccactactgttttgatcttcgttttcagagacctcgtctagaacagatt
aagggtgccatgatgtctattgcatttaaagaaggtttaaaaattccaccacctgcaatg
caagagataatcctggcagcaaatcaggacatcagacaggttttacataatcttaatatg
tggtgtgcaaaagataaatcattgacttatgatgaggctaaaatggatggcagcagagcc
aaaaaggatatcaaactgggcccttttgatgttgtccggaaggtttttgctactggagaa
gaggcttctcgtatgtctcttatagacaaatcggatcttttcttccacgattattcccta
gcacctctctttgtccaagagaactacgtacatgtgaaaccagctgctgctggaggaaat
ctgaaaaagcacttggtgctcttgagtagagcagctgatagcatatgtgatggtgatata
gtggacagacaaattcgtagcaagcaaaactggaaccttcttccgacgcaggctatttat
gcaagcgttctcccgggggagctgatgagaggttacatgtcccagtttcctgtctttccc
agctggctggggaaattttcatccacaggcaaacacgatcggatcattcaagaactggca
atgcacatgagcctcagaacccagacatgcaagaggacagtgaacatggagtatttgtca
tatttgcgggatgcacttgtccagcccttgcaagactttggagcagatggtgtacaaaca
gcgataacgttcatggactcgtactgcttgatgaaagaagatattgaaaatatcatggaa
ataagcacgtggggaggcaagcccagtcctttttcaaagctggatcccaaggtcaaagca
gcttttacacgtgcctacaacaaggaggcacatctgactccatattcacttagttctgtt
aagacatctaaaaggcagtcgggatctgcagtgaccttggaactgactgaagacttgaat
gtggaagagatccagtctgatgaggatgagcaagatactgttgaaagtgatgcaatgatt
aagcaaaaaaaggcgaagtcttccaagatgtcaaaaaaagagaaaagcgaagaaacaaca
aaaaaagaagggaaaagaaaagagaaaacaagacattaa
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integrated database retrieval system
