Egretta garzetta (little egret): 104128986
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Entry
104128986 CDS
T05152
Symbol
VPS50
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin
KO
K23288
syndetin
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egz04131
]
104128986 (VPS50)
Membrane trafficking [BR:
egz04131
]
Protein recycling
Others
EARP complex
104128986 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104128986
NCBI-ProteinID:
XP_035752878
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
ILLKGLRSPQESVHDLSPIESLRIPSKEELRELCEEPTDPQAQQEIINSIEEVYFSNDSF
DIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELERVTSLQT
GLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRL
SEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKN
FDISHYTKVQXXXXXQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDT
KFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHEDHDQDEAAAVSTVSD
GSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVI
SRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFS
ILQLHEFKFMEQSRSPSVSPSKQPASALSTTVTLFEQYCNGGNPFEIQADSKDDETEDVL
ASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDYNL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDT
FESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTAAEERKEKVPSPHLSHLVVLTS
GNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKP
VYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEEFNRRLNEVSKRVRI
PLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
attcttttgaagggtctaagaagtcctcaggagagtgttcatgacctcagtcctattgaa
agcttacggattcctagtaaggaggagctaagagaactatgtgaagaaccaactgatcct
caagctcagcaagaaataattaacagcattgaagaagtttatttttccaatgattccttt
gatatcgtgaagtatgagttagagcggcttcctccagtacttagtcttcaagaactggaa
gagtacagagacaaattaaaacaacagcaagctgctgtatctaagaaagttgcagacttg
attcttgaaaaacagcctgcatatgttcaggaacttgaacgtgttacatcattgcagact
ggccttcagttagcagctgttatttgcacaaatggaagaagacacttaaatatagcaaag
gaaggcttcacacaaactagtttggggcttcttgcaaatcaaaggaaacgacagttgctt
attggactgctgaagtctctgagaacaataaaaacactgcaaagaactgatgtgcgttta
agtgagatgttggaggaagaagactatccaggagctattcagctgtgcttggaatgccag
aaagctgccagcactttcaaacactacagttgtataagtgagttgaattcgaaactgcaa
gacaccttggaacaaatagaggaacaattggatgtagcgctttccaaaatatgcaagaac
tttgatatcagtcattacacaaaggttcagnnnnnnnnnnnnnngcaggcttacaggctg
cttggaaaaacacagacagcaatggaccagttacatatgcacttcactcaagccattcac
aacactgtatttcaagtggtccttggatatgtggagctgtgtgcaggaaacacagacacc
aagtttcagaagttacagtacaaagacctgtgtacacatattacatcagacagctacatc
ccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactacagaacg
atgcagtggcatgaggatcatgaccaagatgaggcagcagctgtgtctactgtttcagat
ggcagcaatgtgatcggaactgaagagaacagttttgaccgcagctatgtaaaaaagaag
ttggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaagacatatctt
ctgggaacagatctgtctaacttcaaatacgatgacttcatatttgtacttgatgttatc
agcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttgcaagaa
tctatcagaaaacaaagtgttaactatttcaaaacgtaccacagaacccgtcttgaagaa
ttaagaatgtttttggagaatgagacatgggaactttgtcctgttaaatcaagctttagt
attctgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtgtcacct
agtaagcagcctgcttcagcactttcaacaacagtgacattatttgagcagtactgtaac
ggaggaaacccatttgaaattcaggccgacagcaaagatgatgagacagaagacgtgtta
gcttccaatgggtatgaatcggatgaacaagaaaaaagtgcatatcaagagtatgatagt
gacagtgatgtacctgaagagttgaaaagagattatgtggatgaacagacaggagatgcc
cctgtgaaaagtgtttctcgagaaactctgaggagcagaaaaagatcagattataacctc
aataaagtgaatgcacctatcttaacaaacactacgctgaatgtaatcaggcttgttggg
aagtacatgcaaatgatgaatattctgaaaccaattgcatttgatgtgatccacttcatg
tcccagctcttcgattactatctgtatgcagtctatacgttttttggccgaaatgacacg
tttgaatcaacagggctgggcctcagtagcagcagattacgcaccacactgaacagaatc
caggagagtctgattgatctggaggtctctgctgatcccacaggaactctcacagctgct
gaagagaggaaggagaaggtgccaagcccacatctcagtcatctcgtagttttgacatct
ggcaattcactatatggtttggcagagagagtggtggccacggaatcattagtatttctg
gctgagcagtttgagtttcttcagcctcatcttgatgcggtgatgccagctgccaagaag
ccttttcttcagcaattctattctcagacagtgtcaactgccagtgaactacgtaaacca
gtttattggattgttgctgctaaagccattgattatgaacaaatgctgcttctcatggct
aatgtgaaatgggatgtgaaggaaatcatgtcacaacacaatatatatgtagatgctctt
ttaaaggaatttgaagaatttaacagaaggttgaatgaggtgtctaagagagtccgtatt
ccactgccggtctccaatatcctttgggaacactgcatacgcttggccaatagaactctc
gtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatgcaactg
gactttcaacaattcttaatgaaactagaaaagttaacagacattaggcctattccagat
aaagaatttgtggagacctacattaaagcatactacctaacagaaaatgacatggaacgc
tggataaaagaacatagggagtattccactaagcagttgaccaatctggtgaatgtttgt
ctgggatcccacatcaacaaaaaggcaagacagaagctgctagctgctattgacgacata
gacaggcctaagagataa
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