Egretta garzetta (little egret): 104129315
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Entry
104129315 CDS
T05152
Name
(RefSeq) protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
egz04515
]
104129315
Cell adhesion molecules [BR:
egz04515
]
Cadherins
Cadherin related
104129315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_2
Cadherin_4
He_PIG
Big_9
Motif
Other DBs
NCBI-GeneID:
104129315
NCBI-ProteinID:
XP_009640532
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MTASAQGGRAGRKAGGQASQPCQPLHLAVVPTGCRLAVLEEQPAGTWGGTLATRPGFPYR
LSEQHALFSINATSGALHTRATIDRESLASDVVDLVVLSSQPTYPSEVRVLVLDLNDNAP
VFPDPSIVVTFKEDTGSGRQLILDTATDADSGTNGVDHGSYRIVAGNEEGRFRLNITLNP
SGEGAFLHLVSRGGLDREATPTYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPIFSQT
LYQARVPEDAPVGASVLQVAAADADEGTNADIRYRLEGGDGGGGEGAGSLPFEVDPESGV
IRIREHLDYEMRQQYSLTVQAMDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSRF
ASVDENAAPGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEVHSSKVPNLSLIKVAA
ALDRERIPAYNLTVAVADNYGALPPPPGSPTSSLSPDGAVAAPVSRSSVASLVIFVNDIN
DHPPVFGQSVYRVNISEEVPLGSYVRGLSATDRDSGLNANLKYSIVSGNELGWFRISEHS
GLVTTAGPEGGTSGHAAGTSISSRLDRETASQVVLNISARDQGVQPKFSYAQLVVTILDV
NDNKPRFSQPEGYQVSLAENSPSGTELLVLSATDGDLGDNGTVRFSLQEAEPALAAVGPS
SVTPRQIFRLDPVSGKLSTISQLDREEQAHFSLQVLATDLGSPPLSSVVRVNVSLLDVND
NSPVFYPVQYFAHIQENEPAGTYVTTVSATDPDLGPNGTVKYSISAGDTSRFQVHGQTGV
ITTKIALDREEKTAYQLQIVATDGGHLQSQNQAIVTITVLDTQDNPPVFSQGMYSFVVFE
NVALGYHVGTVFASTMDLNTNISYLITTGDQRGMFAINRVTGQITTASIIDREEQAFYQL
KVVASGGAITGDAMVNITVKDLNDNSPHFVHAVESVNVVENWKAGHTIFQAKALDPDEGV
NGMVLYSLKQNPKGLFSINEQTGAISLIGPLDINAGSYQVEILASDMGVPQLSSNFILTV
SVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVQASDKDSGVNGEIAYSIIEGNTGDAF
GIFPDGQLYIKSELDRELQERYILLVVASDRAVEPLNATVNVTVILEDVNDNRPLFNSTN
YVFYFEEEQRGGSYVGKINAVDKDFGPNGEVRYSFEHMQPDFELNTVTGEIRSTHQFDRE
ALMRQRGAAVFSLTVIATDQGLPKPLKDQATVQIYVKDINDNAPKFLKDLYQATISELAA
NLTQVLRVSASDVDEGVNGLIHYSVIKGNEENQFAIDSSTGQVTLVGKLDHEASASYSLV
IQAVDSGAVSLSSTCMLSIDVLDENDNSPSFPKSTLLVDVLENMRVGELVSSVTATDSDS
GDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTM
SVVIHVRDFNDNPPNFPPGDIFKSIVENVPVGSSVISVTAHDPDADINGQLTYAIIQQLP
RGNHFRIDEVRGTIFTNAEIDREFANLFELTVKATDQAVPVESRRFALKNVTILVTDQND
NVPVFISQNALAADPSVVIGSILTTIIAADPDEGANGEVEYEIINGDTETFIVDRYSGDL
RVASALVPSQLIYNLIVSATDLGPERRKSTTEMTIILQGVDGPVFTQPKYITILKEGEPI
GTNVISIEAASPRGSEAQVEYYIVSVRCEDKSLGRLFTIGRHTGVIQTAAILDREQGARL
YLVDVYAIEKSSVLPRTQRAEINTSVQMVVSTVEDLRRSSTHYVEDSQEMDAIILPSPLA
DLCGSAAGAYVATTLLKRMTCSPMDNVLVTLGSDVTAID
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatcggcgcagggtggccgtgcggggaggaaagctgggggccaggcttcccaa
ccatgccagcccctccatctggctgtggtgcccacggggtgcaggctggccgtgctggag
gagcagccggccggcacctgggggggcaccctcgccacccgccccggcttcccctaccgc
ctgagcgagcagcacgccctcttctccatcaacgccacctcgggcgccctgcacacccgt
gccaccatcgaccgtgagagcctggccagcgatgtggtggacctggtggtcctctccagc
cagcccacctaccccagcgaggtgcgcgtcctggtgctcgacctcaacgacaatgcgccc
gtcttccccgacccctccatcgtggtgacgttcaaggaggacacgggcagcgggcgccag
cttatcctggacacggccaccgatgctgacagtggcaccaacggcgtagaccatggctcc
taccgcattgtggctggcaacgaggaggggcgcttccggctcaacatcaccctcaacccc
agcggtgaaggagctttcttgcacctggtttcccggggtgggctggaccgggaggccacc
cccacctaccagctgctggtgcaagtggaggacaagggcgagccccgtcgacgggggtac
cttcaggtcaacgtcactgtccaggacattaatgacaacccacccatcttcagccagact
ctctaccaggcacgagtgcctgaggatgcgcctgttggggccagcgttctccaggtggct
gcagctgatgccgatgaaggcaccaatgctgacatccgctaccgcctggaaggaggtgac
ggcggtggtggggagggggctggcagcctcccgtttgaggtggaccctgagagcggggtg
atccgcatccgggagcacttggactatgagatgcgacagcagtactcgctgactgtgcag
gccatggaccgaggggtgccggcgctgagcggccgggctgaggccctcatccgcctgctc
gacgtcaatgataacgagccccgggtgaagttccgctatttcccagccacctcccgcttt
gcctccgtggatgagaacgcggcccctggcaccgtggtggccctcctgacggtgagcgac
gccgactcccctgcggccaacgggaacatctctgtgtcgatcctggcgggaaacgagcag
cggcactttgaggtgcacagcagtaaggtacccaacctcagccttataaaggtagcagcc
gcgttggaccgggagcgcatcccggcctataaccttacggtggcagtggctgataactat
ggggccctgccgccacccccgggctcccccacttcttccctttcccccgatggggcggtg
gcagctcctgtgagccgctcgtcagtagccagcctggtgatctttgtgaatgacattaac
gaccacccccccgtctttgggcagtcggtctacagggtgaacatcagtgaggaggtgccc
ctgggcagctacgtgcggggcctgagcgccacggaccgtgactcgggcctcaacgccaac
ctcaaatacagcatcgtttcaggcaacgagcttggctggtttcgcatcagcgagcacagc
gggctggtcaccacggctggccctgagggtggcacctccgggcacgctgccggcacgtcc
atctccagcaggctggaccgggagactgcttctcaggtggtgctcaacatcagtgcccgt
gaccagggggtgcagcccaagttctcctacgcacagctggtggtgaccatcctggatgtc
aatgacaacaaacctcgcttcagtcaacctgagggctaccaggtgtccctggctgaaaac
tccccgtcgggaactgagctgctggtcctgagcgccacagacggggacctgggggacaac
gggactgtccgcttctcgctgcaggaagctgagccggcgctggcagcggttggcccctcc
tcagtgacccctcgccagatctttcgcttggatcccgtgtcgggcaagctcagcaccatc
tcgcagctagaccgggaggagcaggctcacttctccctgcaggtcctggccactgattta
ggctctcctcccctttcttcagtagttcgagttaacgtgagtcttctggatgtgaatgac
aatagccccgtgttttaccccgttcagtattttgcccatatccaagagaatgagccagct
ggaacctatgtgaccacagtgtctgccacagaccctgatctgggacccaatgggacagtc
aagtacagcatctcagctggagacacctccaggtttcaggtccatggccagacaggggtc
atcacaacaaaaatagcccttgacagggaggagaaaactgcttaccagttgcagatcgtg
gccactgatggtggccaccttcagtcgcagaaccaagccattgtcaccatcactgtcttg
gacacccaggacaacccacctgttttcagccagggcatgtacagttttgttgtctttgaa
aatgttgccctaggttaccatgtcggtactgtttttgcttccaccatggacctcaacacc
aatatcagttaccttatcacaacaggtgaccaaaggggcatgtttgccatcaacagagtg
acggggcagatcaccacagccagtattattgacagggaggagcaagcattttaccagctg
aaagtggttgctagtggtggggcgataactggagatgctatggtcaatataactgtcaaa
gatttaaatgacaattccccgcactttgttcatgcggtggaaagtgtaaatgtggttgaa
aactggaaggctgggcataccatattccaggccaaagctcttgatcctgatgaaggtgtt
aatggcatggtcctttacagccttaagcaaaacccaaagggcttgttttcaatcaatgaa
caaacaggtgccataagcttaatagggccgcttgacataaacgctggctcttaccaggtt
gaaatcctggcctcggatatgggggtgccgcagctctcctctaactttatcctgactgtc
tctgtccatgatgtaaatgataacccacctgtgtttgaccagctttcctatgaaattact
attttggagtcggagcctgtgaattccaggttctttaaggtgcaggcttccgacaaagac
tcaggagtgaatggtgaaatagcttatagtataattgaaggaaatactggggatgccttt
ggcatatttccagatggtcagctgtatataaagagtgaactggaccgtgaacttcaagag
agatatattttactggttgttgcctcagatagagcagtagaaccactcaatgctaccgtg
aatgttaccgtaattctggaggatgtaaatgataacagacccctgttcaacagtaccaac
tatgtattttattttgaagaggagcagagaggtggatcctatgtaggtaaaatcaatgct
gtagataaagactttgggccgaatggtgaagtcaggtattcgtttgagcacatgcagcca
gattttgagctgaacacggtaactggggaaataagaagcactcatcagtttgacagagaa
gctctcatgagacagaggggagctgcagtatttagtctcacggtaatagcaacggatcag
gggttgccgaagcctctaaaggatcaggcaactgtacagatctacgtgaaagacatcaat
gataatgcccccaaatttttgaaagatctctaccaagctactatatcagaattggcagcg
aatctgacgcaggttctgagagtttctgcctcagatgttgatgaaggggttaatggattg
attcactactctgtaatcaagggaaatgaagaaaaccagtttgcaatagatagtagcaca
ggccaagtgaccttagtaggcaaactagatcatgaagctagcgcatcgtattcgcttgtc
atccaagcggtagactccggagcggtttccctaagttcaacttgcatgttgagcattgat
gtattggatgaaaatgataacagtccttccttccctaaatcaaccttgttagtggatgtc
ttggaaaatatgagagtcggtgaacttgtgtcgtctgtcactgccactgattctgattca
ggtgacaatgctgacctccattatagcattacggggacaaacaaccatgggacctttagc
atcagtcccaacaccggtagtatttttcttgcaaagaaactggactttgagacacaatcc
ctgtataagctaaatataacagcgaaagaccaaggaaggccaccacggtcatctacaatg
tcagtggtaatacacgttcgggattttaatgacaaccctcctaattttcctccaggggac
atctttaaatctattgtcgagaatgttcctgttggtagctctgtcatttctgtgactgct
catgatccagatgcggatattaatgggcagctaacgtatgcaatcatccagcagttgccg
aggggtaatcacttccgtatagatgaagtgagagggacaatatttaccaacgctgaaata
gatcgtgagtttgctaatctctttgagttaacagtcaaagccaccgatcaggctgttcct
gtggagtccagacgatttgctttgaagaacgtgaccattttggtgacggatcaaaacgac
aacgttcccgtgttcatatctcaaaatgctcttgcagctgacccctcggttgtgatcggt
tcgatcctaacgacaatcattgctgcggatcctgacgagggcgccaacggagaggtggaa
tatgaaataatcaatggagataccgagaccttcattgtggatcgctatagtggagactta
agagtagcgtcagctttggtgccttctcagctcatatacaatctcatagtttctgccacg
gatcttggccctgagaggagaaaatccaccaccgagatgactataattctgcaaggggtc
gacgggcctgttttcactcagccaaaatacataaccatcttaaaagaaggcgagcctatc
gggacaaacgtgatatctatcgaagcagcgagtcctcggggctccgaagctcaggtggaa
tattacatcgtgtccgtccgatgcgaagataagagtcttgggcgcctcttcaccatcggg
cgccatactggtgtcatccagaccgctgccattttggacagggagcaaggagcgcgtctc
tacttggtggatgtttatgccattgaaaagtcgtctgttttgccccgcacgcaaagagca
gagataaatacttcagtccaaatggtagtatcgactgtggaagatcttaggcgtagcagc
acgcattatgtagaggacagccaagaaatggatgcaatcatcctgccctcacctttggca
gatctgtgtggctctgctgccggagcttatgttgctactacgctcctgaagaggatgacg
tgttcccctatggataacgtgctggtaactcttggaagtgatgtgacagcaattgactaa
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integrated database retrieval system