Egretta garzetta (little egret): 104129563
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Entry
104129563 CDS
T05152
Symbol
CLP1
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104129563 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104129563 (CLP1)
Enzymes [BR:
egz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
104129563 (CLP1)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104129563 (CLP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
TniB
MMR_HSR1
AAA_16
ATP_bind_1
AAA_22
CbiA
AAA_18
nSTAND3
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
104129563
NCBI-ProteinID:
XP_009640808
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
TWRTPLKVKQTLLLPFLRPGHPPRLVPTMTSKKYPVASFTDPHLQVQDITGPYAVSVPVG
VALRTGAADYGLFLDAELRLVRNAHTALEQMRRQAEREDERGPRVMVVGPTDVGKSTVCR
LLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSLQAPLVYHFGSTT
PGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVD
VVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDRIREYFYGFWGCF
YPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLRKRVPGTPGRDMVHHLLSVSTA
DSPDDNISETSVAGFIVVTGVDLERQGFTVLSPAPRPLPKNFLLIMDIRFMDLK
NT seq
1247 nt
NT seq
+upstream
nt +downstream
nt
ccacctggcgcacgccgctgaaggtcaagcagacgctgctgctgcccttcctgcgccccg
ggcaccccccccgcctggtgcctaccatgaccagcaagaagtacccggtggcctccttca
ctgacccccacctgcaggtccaggacatcactggtccctatgcagtgtccgtccctgtgg
gggtggcactgaggacgggtgctgcagactatgggctgttcctggatgcggaactgcggc
tcgtccgcaacgcccacacggccctggagcagatgcggcggcaggcagagagggaggatg
agcgggggccccgcgtcatggtggttggacccaccgacgtgggtaagtcgaccgtgtgcc
gcctgctgctgaactacgccgtgcgcctggggcgccggcccaccttcgtggagctagatg
tgggccagggctctgtctccatccctggcaccatgggcgctctctacatcgagcggccgg
ccgacgtggaggagggcttctccctccaggccccgctcgtctaccacttcggctccacca
cgcccggcaccaacatcaaactctacaacaagatcacatcccgcctggccgacgtcttca
accagcgctgcgaagtgaaccgccgtgcctcggtgagcggctgcgtcatcaacacctgtg
gctgggtgaagggctcgggctaccaggcgctggtgcatgctgcctccgctttcgaggtgg
acgtggtggtggtgctggaccaggagcggctctacaatgagctgaagagggacctgcccc
actttgtgcgcaccgtcctgctccccaagtccggcggggtggtggagcgctccaaggact
tccggcgggagtgccgagatgaccgcatccgggagtatttctatggcttttggggctgct
tctacccccacgctttcgacgtcaagttctccgacgtcaagatctacaaggtgggggctc
ccaccatcccggactcctgcctgcccctgggcatgtcgcaggaggacaaccagctgagaa
agcgggtgccggggacgccggggcgggacatggtgcaccacctcctgagcgtcagcaccg
ctgacagccccgacgacaacatctcggagaccagcgtggccggcttcatcgtcgtcaccg
gcgtcgacctggagcgccagggcttcaccgtcctctcccctgccccccggcccctgccca
agaacttcctcctcatcatggacattcgcttcatggacctgaagtaa
DBGET
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