Egretta garzetta (little egret): 104129724
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Entry
104129724 CDS
T05152
Symbol
TNR
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-R
KO
K06252
tenascin
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04510
Focal adhesion
egz04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104129724 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104129724 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
egz00536
]
104129724 (TNR)
Glycosaminoglycan binding proteins [BR:
egz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104129724 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Interfer-bind
FN3_Tor_3rd
EGF_2
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
104129724
NCBI-ProteinID:
XP_035753959
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MGTDSENPVLRNMLISFNLLLLGAILKPFECRLEVTTEPAERPVVDEEGGLANCSPPIKE
QPMVFHHIYNINIPLDSCCSSMFKSSAEEVSSEDDRLAEYAEQTSDSESQVTFTHRINLP
KQACKCSTSLPSLQELLSRIEMLEREVSMLRDQCNSNCCQENAATGQLDYTPQCSGHGNF
SLESCSCVCMEGWAGSNCSEPRCPRGCSSRGVCLEGQCICDNDYGGEDCSQLRCPTGCGS
RGLCVDGECVCEEGFTGEDCSQLRCPRDCSGKGHCANGTCICQEGYAGEDCGWLHCPNAC
SSRGVCQDGLCVCEEGYEGQDCSAVAPPENLRVMGISDSSIELAWDSPGAATEYVISYQP
AGPGGTHLQQRVPGDWSSITITELEPGIAYNISIYAVINDILSIPVTSKVMTNLATPQGL
KFKTITETTAEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKEQARSPPTSDSVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDXXXXXXXXX
XNSLQALRPGARYRLAVSALRGANESRPALAQFTTXXXAPKNLRVGSRTPTSLELTWDNS
EAEVHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLTDLVPGTEYGIGISAVMDSQQSVP
ATMNARTELDSPRDLLVTASTETSISLTWTKATGPIDHYRVTFTPASGMASEVTVPRDES
QLTLSELEPGTEYTITIIAERGRQQSLEATVDAFTGVRPITQLHFSQLTSSSVNVTWSDP
SPPADRLVLTYSXGPRRHASLTGLQPSTEYLVSLVSVHGAVSSEPVVGSITTGIDAPKDL
RVGNVTQESMIIYWSSPVAAFDHYRISYRAAEGRTESTAIASDATEYILHHLQPATKYEI
GVKSVRGREESEVASITVHTAMDAPLGVTATNITPTEALLQWNPPLSEVESYILVLTRRA
VAGETILVDGVNQEYQLTNLLPSTTYTVSMYATNGPLTSQTISTNFTTLLDPPTNLTASE
VTRRSALLSWVPPVGEIENYVMTYRSTDGSRKELIVDAEDTWIRLEGLSETTEYTVRLQA
AQNAMRSGFISTTFTTGGRVFANPQDCAQHLMNGDTLSGIYTISINGDLSQRVQVYCDMT
TDGGGWIVFQRRQNGLTDFFRKWADYRVGFGNLEDEFWLGLDNIHKITSQGRYELRIDMR
DGQEAAYAYYDKFSIGDARSLYKLRIGDYNGTSGDSLSYHQGRPFSTKDRDNDVAVTNCA
MSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRNISGR
KRRSLQL
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgacagtgaaaacccagttctgaggaacatgctcatcagcttcaacttgctt
ctgctgggcgccatcctcaaacctttcgagtgccggctggaggtgacaacagagccggct
gagaggccagtggtggatgaggaaggtggccttgccaactgcagcccacccattaaagag
cagcccatggtcttccaccacatctacaacatcaacatccctctggacagctgctgctcg
tccatgttcaagtcttcggccgaggaggtgagttcagaagacgaccggctggcagagtac
gcggagcagacctctgacagtgagagccaggtcaccttcacccacaggataaacttgccc
aagcaggcctgcaagtgctccacctccctcccgtccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatgctccgggaccaatgcaactccaattgctgccaa
gaaaatgcagccacagggcagctggattacaccccgcagtgcagcggccacgggaacttc
agcctggagtcgtgcagctgtgtgtgcatggagggctgggccggcagcaactgctctgag
ccccgctgcccccggggctgctccagccgcggcgtctgcctggagggccagtgcatctgt
gacaacgactacgggggcgaggactgctcccagctccgctgccccaccggctgtggctcc
cgtgggctctgcgtggatggcgagtgcgtctgcgaagagggcttcaccggggaggattgc
tcccagctgcggtgcccccgcgactgctccgggaagggccactgcgccaatggcacatgc
atctgccaggagggctacgccggggaggactgcgggtggctccactgccccaacgcctgc
agcagccgcggggtctgccaggacggtctctgtgtctgcgaggaaggctacgaagggcag
gactgctcggcagtggctcctcctgaaaacctgcgagtgatggggatcagcgacagctcc
atcgagctggcgtgggacagccctggggcagccaccgagtacgtcatctcataccagccg
gcggggccagggggcacccacctccagcagcgggtgcctggggactggagcagcatcacc
atcacagagctggagccgggcattgcctacaacatcagcatctatgcagtcatcaacgac
atcttgagcatccctgttacctccaaggtgatgaccaaccttgccacaccgcaggggctg
aagttcaagaccatcacagagacgacggcagaggtgcagtgggagcccttttccttcccc
ttcgatggttgggagatcagcttcatccccaagaacaatgagggcggcgtgattgcccag
ctccccagcaccgtcaccaccttcaaccagacggggctgaagccgggagaagagtacacc
gtcaccgtggtggccctgaaggaacaagccaggagccctcccacctctgacagcgtctca
accctcatcgacggtccgacacagatcctggtgcgggatgtctccgacacagtggccttt
gtagagtggacaccgccacgtgccaaggtggacannnnnnnnnnnnnnnnnnnnnnnnnn
nngaactccctgcaggccctgcgccccggcgcccgctaccgcctcgccgtcagcgccctc
cggggtgccaacgagagccggccagccctcgcccagttcaccacnnnnnnnnnngccccc
aagaacctgcgggtgggctcgcggacacccaccagccttgagctcacctgggacaacagc
gaggctgaggtccacagctacagggtggtctacagcaccctggccggggaacactaccac
gaagtcctggtgccacgggacactggtcccaccacccgggccaccctcacagatctggtg
ccggggacagagtacggcattgggatttcagctgtgatggacagccagcagagcgtgcca
gcaaccatgaacgccaggaccgagcttgacagcccccgggacctcctggtgacagcctcc
acggagacatccatctcgttgacctggaccaaagccacgggtcccattgaccactaccgt
gtcaccttcacccctgcctcggggatggcctctgaagtgacggtgccccgggacgagtcg
cagctcaccctctcagagctggagcctgggacagagtacaccatcaccatcatcgcagag
aggggacgccagcagagcctggaggctactgtggacgccttcacaggggtccggcccatc
acacagctccacttctcccagctgacatcctccagcgtgaacgtcacatggagtgatcca
tccccaccagcagaccgccttgtcctcacctacagcnncggcccccgcaggcacgccagc
ctgacaggcttgcagccatccactgagtacctagtgtctttggtgtccgtgcatggtgcc
gtcagctctgagcctgttgtgggctccatcacgacagggatcgatgcgccaaaggacctc
agggtgggtaacgtcacccaggagtccatgatcatctactggagctctccagtcgctgcc
ttcgatcactatagaatatcctaccgtgctgctgaagggagaacagagagcactgccatt
gccagcgatgccaccgagtacatcctccaccacctgcagcccgccaccaagtatgagatt
ggggtgaagagcgtgcggggccgggaggagagcgaggtggcctccatcaccgtgcacaca
gctatggatgcccctttgggggtcacagccaccaacatcacccccactgaggcactgctg
cagtggaacccaccactctcagaggtggaaagctacatcctcgtcctcacccgccgcgca
gttgcaggagaaacaattcttgtggatggagtcaaccaggagtaccagctgaccaacctc
ctgcccagtaccacctacacagtctctatgtacgccaccaatgggcctctcaccagtcag
accatcagcaccaactttacaactcttttggatcctccaacaaatctgactgcgagcgaa
gtgactcgacggagtgctctgctctcctgggtgcctcccgtgggagagatcgagaactat
gtcatgacctacagatccactgatggcagccggaaggagctgattgtggatgctgaggac
acatggatccgcctggaggggctttctgagaccacagagtacactgtgcgcctgcaagct
gcccagaacgccatgcggagcggcttcatctccaccactttcaccacaggcggccgtgtc
tttgctaaccctcaggactgcgcccagcacctgatgaatggagacacgctgagcggcatc
tacaccatctccatcaacggggacctcagccagcgagtgcaggtgtactgcgacatgacc
accgacggaggcggctggattgtcttccagaggcggcagaatgggctgaccgatttcttc
cggaaatgggcagattaccgggtgggcttcggtaacttggaggacgagttttggctgggc
ttggataacatccacaagatcacatcccaagggcgctacgagttgcgaatagacatgagg
gatggccaggaagcggcgtatgcctactatgacaagttctccattggcgatgcccgcagc
ctgtacaagctgcgaatcggggactacaatggcacttcaggggactccctcagctatcac
cagggccgccccttctccaccaaggacagggacaatgacgtggctgtgaccaactgcgcc
atgtcctataaaggggcctggtggtataagaactgccaccgcaccaacctcaatggcaag
tacggagagtcccggcacagtcaggggattaactggtaccattggaaaggccacgagttc
tccatcccctttgtggaaatgaagatgcgaccttacaaccaccgtaacatctctgggagg
aagcgacggtccctacagctctga
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